Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC25Q86WR0 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC25Q86WR0 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC25Q86WR0 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC25Q86WR0 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC25Q86WR0 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC25Q86WR0 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CCDC25Q86WR0 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC25Q86WR0 BICD1-207ENST00000551848 1962 ntBASIC19.61■□□□□ 0.73
CCDC25Q86WR0 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
CCDC25Q86WR0 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC25Q86WR0 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC25Q86WR0 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC25Q86WR0 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.61■□□□□ 0.73
CCDC25Q86WR0 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.61■□□□□ 0.73
CCDC25Q86WR0 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.61■□□□□ 0.73
CCDC25Q86WR0 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CCDC25Q86WR0 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CCDC25Q86WR0 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC25Q86WR0 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC25Q86WR0 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC25Q86WR0 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC25Q86WR0 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC25Q86WR0 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC25Q86WR0 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC25Q86WR0 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC25Q86WR0 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CCDC25Q86WR0 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC25Q86WR0 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC25Q86WR0 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC25Q86WR0 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC25Q86WR0 KRT8P8-201ENST00000434750 1448 ntBASIC19.6■□□□□ 0.73
CCDC25Q86WR0 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC25Q86WR0 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC25Q86WR0 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC25Q86WR0 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC25Q86WR0 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC25Q86WR0 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC25Q86WR0 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC25Q86WR0 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC25Q86WR0 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CCDC25Q86WR0 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC25Q86WR0 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CCDC25Q86WR0 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CCDC25Q86WR0 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC25Q86WR0 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC25Q86WR0 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC25Q86WR0 RPS2P52-201ENST00000469610 820 ntBASIC19.6■□□□□ 0.73
CCDC25Q86WR0 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC25Q86WR0 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.6■□□□□ 0.73
CCDC25Q86WR0 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC25Q86WR0 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC25Q86WR0 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC25Q86WR0 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC25Q86WR0 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC25Q86WR0 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC25Q86WR0 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CCDC25Q86WR0 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC25Q86WR0 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC25Q86WR0 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC25Q86WR0 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CCDC25Q86WR0 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CCDC25Q86WR0 AP006587.1-201ENST00000534129 1502 ntBASIC19.6■□□□□ 0.73
CCDC25Q86WR0 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC25Q86WR0 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC25Q86WR0 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC25Q86WR0 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC25Q86WR0 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC25Q86WR0 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC25Q86WR0 PCDHB18P-201ENST00000524813 2368 ntBASIC19.59■□□□□ 0.73
CCDC25Q86WR0 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CCDC25Q86WR0 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC25Q86WR0 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC25Q86WR0 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CCDC25Q86WR0 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC25Q86WR0 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC25Q86WR0 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC25Q86WR0 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC25Q86WR0 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC25Q86WR0 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CCDC25Q86WR0 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC25Q86WR0 AL354751.1-201ENST00000412768 1863 ntBASIC19.59■□□□□ 0.73
CCDC25Q86WR0 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC25Q86WR0 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC25Q86WR0 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.59■□□□□ 0.73
CCDC25Q86WR0 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.59■□□□□ 0.73
CCDC25Q86WR0 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.59■□□□□ 0.73
CCDC25Q86WR0 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.59■□□□□ 0.73
CCDC25Q86WR0 AC105036.2-201ENST00000569468 176 ntBASIC19.59■□□□□ 0.73
CCDC25Q86WR0 AC133552.2-202ENST00000575694 574 ntBASIC19.59■□□□□ 0.73
CCDC25Q86WR0 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC25Q86WR0 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC25Q86WR0 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC25Q86WR0 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC25Q86WR0 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC25Q86WR0 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.58■□□□□ 0.73
CCDC25Q86WR0 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.58■□□□□ 0.73
CCDC25Q86WR0 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.73
CCDC25Q86WR0 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC25Q86WR0 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms