Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
USP48Q86UV5 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
USP48Q86UV5 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
USP48Q86UV5 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC23.28■■□□□ 1.32
USP48Q86UV5 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC23.28■■□□□ 1.32
USP48Q86UV5 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC23.28■■□□□ 1.32
USP48Q86UV5 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC23.28■■□□□ 1.32
USP48Q86UV5 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC23.28■■□□□ 1.32
USP48Q86UV5 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
USP48Q86UV5 ETFA-216ENST00000560726 942 ntTSL 3 BASIC23.28■■□□□ 1.32
USP48Q86UV5 IRF5-214ENST00000613821 595 ntTSL 5 BASIC23.28■■□□□ 1.32
USP48Q86UV5 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC23.28■■□□□ 1.32
USP48Q86UV5 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
USP48Q86UV5 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC23.28■■□□□ 1.32
USP48Q86UV5 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
USP48Q86UV5 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC23.28■■□□□ 1.32
USP48Q86UV5 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
USP48Q86UV5 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
USP48Q86UV5 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC23.27■■□□□ 1.32
USP48Q86UV5 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
USP48Q86UV5 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
USP48Q86UV5 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
USP48Q86UV5 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
USP48Q86UV5 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
USP48Q86UV5 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
USP48Q86UV5 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
USP48Q86UV5 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
USP48Q86UV5 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
USP48Q86UV5 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
USP48Q86UV5 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC23.27■■□□□ 1.32
USP48Q86UV5 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
USP48Q86UV5 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC23.27■■□□□ 1.32
USP48Q86UV5 VENTXP5-201ENST00000523979 775 ntBASIC23.27■■□□□ 1.32
USP48Q86UV5 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC23.27■■□□□ 1.32
USP48Q86UV5 AL512604.3-201ENST00000569583 964 ntBASIC23.27■■□□□ 1.32
USP48Q86UV5 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
USP48Q86UV5 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
USP48Q86UV5 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
USP48Q86UV5 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
USP48Q86UV5 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
USP48Q86UV5 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC23.27■■□□□ 1.31
USP48Q86UV5 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
USP48Q86UV5 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
USP48Q86UV5 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
USP48Q86UV5 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
USP48Q86UV5 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC23.26■■□□□ 1.31
USP48Q86UV5 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
USP48Q86UV5 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
USP48Q86UV5 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
USP48Q86UV5 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
USP48Q86UV5 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
USP48Q86UV5 FXN-203ENST00000396366 922 ntTSL 2 BASIC23.26■■□□□ 1.31
USP48Q86UV5 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC23.26■■□□□ 1.31
USP48Q86UV5 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC23.26■■□□□ 1.31
USP48Q86UV5 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
USP48Q86UV5 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
USP48Q86UV5 POLI-202ENST00000406285 2030 ntTSL 2 BASIC23.26■■□□□ 1.31
USP48Q86UV5 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC23.26■■□□□ 1.31
USP48Q86UV5 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC23.26■■□□□ 1.31
USP48Q86UV5 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
USP48Q86UV5 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
USP48Q86UV5 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
USP48Q86UV5 AP000974.1-201ENST00000623909 2387 ntBASIC23.26■■□□□ 1.31
USP48Q86UV5 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC23.25■■□□□ 1.31
USP48Q86UV5 KRT16P6-202ENST00000425692 1426 ntBASIC23.25■■□□□ 1.31
USP48Q86UV5 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
USP48Q86UV5 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
USP48Q86UV5 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
USP48Q86UV5 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC23.25■■□□□ 1.31
USP48Q86UV5 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
USP48Q86UV5 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
USP48Q86UV5 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC23.25■■□□□ 1.31
USP48Q86UV5 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
USP48Q86UV5 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
USP48Q86UV5 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
USP48Q86UV5 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC23.25■■□□□ 1.31
USP48Q86UV5 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC23.25■■□□□ 1.31
USP48Q86UV5 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC23.25■■□□□ 1.31
USP48Q86UV5 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC23.25■■□□□ 1.31
USP48Q86UV5 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC23.25■■□□□ 1.31
USP48Q86UV5 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
USP48Q86UV5 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
USP48Q86UV5 TMEM179-206ENST00000616017 1645 ntBASIC23.25■■□□□ 1.31
USP48Q86UV5 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
USP48Q86UV5 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
USP48Q86UV5 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC23.25■■□□□ 1.31
USP48Q86UV5 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
USP48Q86UV5 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC23.24■■□□□ 1.31
USP48Q86UV5 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
USP48Q86UV5 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
USP48Q86UV5 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
USP48Q86UV5 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC23.24■■□□□ 1.31
USP48Q86UV5 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
USP48Q86UV5 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
USP48Q86UV5 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
USP48Q86UV5 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
USP48Q86UV5 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
USP48Q86UV5 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC23.24■■□□□ 1.31
USP48Q86UV5 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC23.24■■□□□ 1.31
USP48Q86UV5 AL136038.3-201ENST00000561909 1096 ntBASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms