Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.22■□□□□ 0.19
RAI1Q7Z5J4 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RAI1Q7Z5J4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAI1Q7Z5J4 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC16.22■□□□□ 0.19
RAI1Q7Z5J4 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RAI1Q7Z5J4 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAI1Q7Z5J4 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAI1Q7Z5J4 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAI1Q7Z5J4 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.21■□□□□ 0.19
RAI1Q7Z5J4 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAI1Q7Z5J4 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
RAI1Q7Z5J4 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.21■□□□□ 0.19
RAI1Q7Z5J4 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RAI1Q7Z5J4 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
RAI1Q7Z5J4 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.21■□□□□ 0.19
RAI1Q7Z5J4 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.21■□□□□ 0.19
RAI1Q7Z5J4 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.21■□□□□ 0.19
RAI1Q7Z5J4 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAI1Q7Z5J4 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.21■□□□□ 0.19
RAI1Q7Z5J4 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAI1Q7Z5J4 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
RAI1Q7Z5J4 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAI1Q7Z5J4 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RAI1Q7Z5J4 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.21■□□□□ 0.19
RAI1Q7Z5J4 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAI1Q7Z5J4 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAI1Q7Z5J4 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.21■□□□□ 0.19
RAI1Q7Z5J4 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RAI1Q7Z5J4 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
RAI1Q7Z5J4 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.21■□□□□ 0.19
RAI1Q7Z5J4 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
RAI1Q7Z5J4 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.21■□□□□ 0.19
RAI1Q7Z5J4 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.21■□□□□ 0.19
RAI1Q7Z5J4 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.21■□□□□ 0.19
RAI1Q7Z5J4 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.21■□□□□ 0.19
RAI1Q7Z5J4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RAI1Q7Z5J4 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
RAI1Q7Z5J4 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAI1Q7Z5J4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAI1Q7Z5J4 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAI1Q7Z5J4 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RAI1Q7Z5J4 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAI1Q7Z5J4 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
RAI1Q7Z5J4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC16.2■□□□□ 0.18
RAI1Q7Z5J4 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.2■□□□□ 0.18
RAI1Q7Z5J4 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAI1Q7Z5J4 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.2■□□□□ 0.18
RAI1Q7Z5J4 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.2■□□□□ 0.18
RAI1Q7Z5J4 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.2■□□□□ 0.18
RAI1Q7Z5J4 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAI1Q7Z5J4 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.2■□□□□ 0.18
RAI1Q7Z5J4 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAI1Q7Z5J4 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAI1Q7Z5J4 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAI1Q7Z5J4 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAI1Q7Z5J4 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
RAI1Q7Z5J4 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
RAI1Q7Z5J4 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAI1Q7Z5J4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAI1Q7Z5J4 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.2■□□□□ 0.18
RAI1Q7Z5J4 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.2■□□□□ 0.18
RAI1Q7Z5J4 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAI1Q7Z5J4 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAI1Q7Z5J4 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAI1Q7Z5J4 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.2■□□□□ 0.18
RAI1Q7Z5J4 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAI1Q7Z5J4 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAI1Q7Z5J4 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAI1Q7Z5J4 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAI1Q7Z5J4 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAI1Q7Z5J4 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.19■□□□□ 0.18
RAI1Q7Z5J4 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.19■□□□□ 0.18
RAI1Q7Z5J4 MIR3180-1-201ENST00000580374 94 ntBASIC16.19■□□□□ 0.18
RAI1Q7Z5J4 MIR3180-3-201ENST00000584616 94 ntBASIC16.19■□□□□ 0.18
RAI1Q7Z5J4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAI1Q7Z5J4 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
RAI1Q7Z5J4 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.19■□□□□ 0.18
RAI1Q7Z5J4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAI1Q7Z5J4 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAI1Q7Z5J4 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAI1Q7Z5J4 GPAT2P1-201ENST00000444924 1672 ntBASIC16.19■□□□□ 0.18
RAI1Q7Z5J4 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAI1Q7Z5J4 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAI1Q7Z5J4 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAI1Q7Z5J4 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.19■□□□□ 0.18
RAI1Q7Z5J4 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAI1Q7Z5J4 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAI1Q7Z5J4 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAI1Q7Z5J4 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.19■□□□□ 0.18
RAI1Q7Z5J4 AC140113.3-201ENST00000605663 199 ntBASIC16.19■□□□□ 0.18
RAI1Q7Z5J4 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAI1Q7Z5J4 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAI1Q7Z5J4 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAI1Q7Z5J4 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAI1Q7Z5J4 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
RAI1Q7Z5J4 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAI1Q7Z5J4 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAI1Q7Z5J4 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.18■□□□□ 0.18
RAI1Q7Z5J4 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAI1Q7Z5J4 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms