Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
PPP4R4Q6NUP7 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PPP4R4Q6NUP7 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PPP4R4Q6NUP7 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.21■□□□□ 0.51
PPP4R4Q6NUP7 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.21■□□□□ 0.51
PPP4R4Q6NUP7 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PPP4R4Q6NUP7 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PPP4R4Q6NUP7 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PPP4R4Q6NUP7 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PPP4R4Q6NUP7 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.21■□□□□ 0.51
PPP4R4Q6NUP7 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PPP4R4Q6NUP7 AC141586.3-201ENST00000562166 1838 ntBASIC18.21■□□□□ 0.51
PPP4R4Q6NUP7 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PPP4R4Q6NUP7 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.21■□□□□ 0.51
PPP4R4Q6NUP7 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
PPP4R4Q6NUP7 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
PPP4R4Q6NUP7 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
PPP4R4Q6NUP7 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.2■□□□□ 0.5
PPP4R4Q6NUP7 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PPP4R4Q6NUP7 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PPP4R4Q6NUP7 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PPP4R4Q6NUP7 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.2■□□□□ 0.5
PPP4R4Q6NUP7 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PPP4R4Q6NUP7 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PPP4R4Q6NUP7 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PPP4R4Q6NUP7 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.2■□□□□ 0.5
PPP4R4Q6NUP7 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PPP4R4Q6NUP7 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.2■□□□□ 0.5
PPP4R4Q6NUP7 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.2■□□□□ 0.5
PPP4R4Q6NUP7 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.2■□□□□ 0.5
PPP4R4Q6NUP7 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PPP4R4Q6NUP7 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
PPP4R4Q6NUP7 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.2■□□□□ 0.5
PPP4R4Q6NUP7 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PPP4R4Q6NUP7 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.2■□□□□ 0.5
PPP4R4Q6NUP7 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.2■□□□□ 0.5
PPP4R4Q6NUP7 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PPP4R4Q6NUP7 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PPP4R4Q6NUP7 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PPP4R4Q6NUP7 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PPP4R4Q6NUP7 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PPP4R4Q6NUP7 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.19■□□□□ 0.5
PPP4R4Q6NUP7 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PPP4R4Q6NUP7 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PPP4R4Q6NUP7 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PPP4R4Q6NUP7 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
PPP4R4Q6NUP7 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PPP4R4Q6NUP7 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PPP4R4Q6NUP7 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PPP4R4Q6NUP7 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PPP4R4Q6NUP7 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PPP4R4Q6NUP7 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PPP4R4Q6NUP7 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PPP4R4Q6NUP7 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PPP4R4Q6NUP7 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PPP4R4Q6NUP7 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PPP4R4Q6NUP7 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
PPP4R4Q6NUP7 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.19■□□□□ 0.5
PPP4R4Q6NUP7 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PPP4R4Q6NUP7 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.19■□□□□ 0.5
PPP4R4Q6NUP7 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.19■□□□□ 0.5
PPP4R4Q6NUP7 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.18■□□□□ 0.5
PPP4R4Q6NUP7 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PPP4R4Q6NUP7 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.18■□□□□ 0.5
PPP4R4Q6NUP7 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PPP4R4Q6NUP7 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.18■□□□□ 0.5
PPP4R4Q6NUP7 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PPP4R4Q6NUP7 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PPP4R4Q6NUP7 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PPP4R4Q6NUP7 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.18■□□□□ 0.5
PPP4R4Q6NUP7 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.18■□□□□ 0.5
PPP4R4Q6NUP7 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PPP4R4Q6NUP7 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PPP4R4Q6NUP7 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PPP4R4Q6NUP7 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.18■□□□□ 0.5
PPP4R4Q6NUP7 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.18■□□□□ 0.5
PPP4R4Q6NUP7 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.18■□□□□ 0.5
PPP4R4Q6NUP7 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.18■□□□□ 0.5
PPP4R4Q6NUP7 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PPP4R4Q6NUP7 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.18■□□□□ 0.5
PPP4R4Q6NUP7 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.18■□□□□ 0.5
PPP4R4Q6NUP7 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.18■□□□□ 0.5
PPP4R4Q6NUP7 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.18■□□□□ 0.5
PPP4R4Q6NUP7 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.18■□□□□ 0.5
PPP4R4Q6NUP7 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PPP4R4Q6NUP7 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.18■□□□□ 0.5
PPP4R4Q6NUP7 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PPP4R4Q6NUP7 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PPP4R4Q6NUP7 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PPP4R4Q6NUP7 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PPP4R4Q6NUP7 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PPP4R4Q6NUP7 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PPP4R4Q6NUP7 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PPP4R4Q6NUP7 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PPP4R4Q6NUP7 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PPP4R4Q6NUP7 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PPP4R4Q6NUP7 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PPP4R4Q6NUP7 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.17■□□□□ 0.5
PPP4R4Q6NUP7 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PPP4R4Q6NUP7 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms