Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
CDC42BPAQ5VT25 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC28.79■■■□□ 2.2
CDC42BPAQ5VT25 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
CDC42BPAQ5VT25 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
CDC42BPAQ5VT25 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC28.79■■■□□ 2.2
CDC42BPAQ5VT25 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC28.79■■■□□ 2.2
CDC42BPAQ5VT25 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC28.79■■■□□ 2.2
CDC42BPAQ5VT25 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC28.79■■■□□ 2.2
CDC42BPAQ5VT25 SLC25A6P4-201ENST00000586535 553 ntBASIC28.79■■■□□ 2.2
CDC42BPAQ5VT25 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
CDC42BPAQ5VT25 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC28.79■■■□□ 2.2
CDC42BPAQ5VT25 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
CDC42BPAQ5VT25 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
CDC42BPAQ5VT25 AL137060.1-201ENST00000618151 2648 ntBASIC28.79■■■□□ 2.2
CDC42BPAQ5VT25 RCC2P3-201ENST00000418112 1537 ntBASIC28.78■■■□□ 2.2
CDC42BPAQ5VT25 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC28.78■■■□□ 2.2
CDC42BPAQ5VT25 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
CDC42BPAQ5VT25 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC28.78■■■□□ 2.2
CDC42BPAQ5VT25 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC28.78■■■□□ 2.2
CDC42BPAQ5VT25 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC28.78■■■□□ 2.2
CDC42BPAQ5VT25 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC28.78■■■□□ 2.2
CDC42BPAQ5VT25 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC28.78■■■□□ 2.2
CDC42BPAQ5VT25 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
CDC42BPAQ5VT25 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
CDC42BPAQ5VT25 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
CDC42BPAQ5VT25 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
CDC42BPAQ5VT25 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC28.78■■■□□ 2.2
CDC42BPAQ5VT25 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CDC42BPAQ5VT25 TSPY19P-201ENST00000418461 509 ntBASIC28.77■■■□□ 2.2
CDC42BPAQ5VT25 GRAMD4P1-201ENST00000435181 1110 ntBASIC28.77■■■□□ 2.2
CDC42BPAQ5VT25 TSPY18P-201ENST00000441642 509 ntBASIC28.77■■■□□ 2.2
CDC42BPAQ5VT25 AC104390.1-201ENST00000555663 520 ntBASIC28.77■■■□□ 2.2
CDC42BPAQ5VT25 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC28.77■■■□□ 2.2
CDC42BPAQ5VT25 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC28.77■■■□□ 2.2
CDC42BPAQ5VT25 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
CDC42BPAQ5VT25 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC28.77■■■□□ 2.2
CDC42BPAQ5VT25 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CDC42BPAQ5VT25 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC28.77■■■□□ 2.2
CDC42BPAQ5VT25 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC28.77■■■□□ 2.2
CDC42BPAQ5VT25 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC28.77■■■□□ 2.2
CDC42BPAQ5VT25 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC28.77■■■□□ 2.2
CDC42BPAQ5VT25 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC28.77■■■□□ 2.2
CDC42BPAQ5VT25 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC28.77■■■□□ 2.2
CDC42BPAQ5VT25 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC28.77■■■□□ 2.2
CDC42BPAQ5VT25 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC28.77■■■□□ 2.2
CDC42BPAQ5VT25 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC28.77■■■□□ 2.2
CDC42BPAQ5VT25 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC28.76■■■□□ 2.19
CDC42BPAQ5VT25 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC28.76■■■□□ 2.19
CDC42BPAQ5VT25 FAAHP1-202ENST00000446499 1238 ntBASIC28.76■■■□□ 2.19
CDC42BPAQ5VT25 AC009078.2-202ENST00000463353 338 ntBASIC28.76■■■□□ 2.19
CDC42BPAQ5VT25 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC28.76■■■□□ 2.19
CDC42BPAQ5VT25 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC28.76■■■□□ 2.19
CDC42BPAQ5VT25 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
CDC42BPAQ5VT25 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
CDC42BPAQ5VT25 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
CDC42BPAQ5VT25 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
CDC42BPAQ5VT25 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
CDC42BPAQ5VT25 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC28.75■■■□□ 2.19
CDC42BPAQ5VT25 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC28.75■■■□□ 2.19
CDC42BPAQ5VT25 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC28.75■■■□□ 2.19
CDC42BPAQ5VT25 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
CDC42BPAQ5VT25 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC28.75■■■□□ 2.19
CDC42BPAQ5VT25 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC28.75■■■□□ 2.19
CDC42BPAQ5VT25 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC28.75■■■□□ 2.19
CDC42BPAQ5VT25 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
CDC42BPAQ5VT25 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
CDC42BPAQ5VT25 AC104692.2-201ENST00000603054 253 ntBASIC28.75■■■□□ 2.19
CDC42BPAQ5VT25 AC023511.2-201ENST00000618803 211 ntBASIC28.75■■■□□ 2.19
CDC42BPAQ5VT25 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
CDC42BPAQ5VT25 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC28.75■■■□□ 2.19
CDC42BPAQ5VT25 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC28.75■■■□□ 2.19
CDC42BPAQ5VT25 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
CDC42BPAQ5VT25 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
CDC42BPAQ5VT25 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC28.74■■■□□ 2.19
CDC42BPAQ5VT25 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC28.74■■■□□ 2.19
CDC42BPAQ5VT25 GPR32P1-201ENST00000601788 811 ntBASIC28.74■■■□□ 2.19
CDC42BPAQ5VT25 KATNBL1P6-202ENST00000562413 1466 ntBASIC28.74■■■□□ 2.19
CDC42BPAQ5VT25 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC28.74■■■□□ 2.19
CDC42BPAQ5VT25 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC28.74■■■□□ 2.19
CDC42BPAQ5VT25 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC28.74■■■□□ 2.19
CDC42BPAQ5VT25 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
CDC42BPAQ5VT25 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
CDC42BPAQ5VT25 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC28.74■■■□□ 2.19
CDC42BPAQ5VT25 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
CDC42BPAQ5VT25 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC28.74■■■□□ 2.19
CDC42BPAQ5VT25 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC28.74■■■□□ 2.19
CDC42BPAQ5VT25 AL845331.1-201ENST00000424978 1190 ntBASIC28.74■■■□□ 2.19
CDC42BPAQ5VT25 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC28.74■■■□□ 2.19
CDC42BPAQ5VT25 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC28.74■■■□□ 2.19
CDC42BPAQ5VT25 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC28.74■■■□□ 2.19
CDC42BPAQ5VT25 AL390719.2-201ENST00000606993 987 ntBASIC28.74■■■□□ 2.19
CDC42BPAQ5VT25 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
CDC42BPAQ5VT25 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC28.74■■■□□ 2.19
CDC42BPAQ5VT25 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC28.74■■■□□ 2.19
CDC42BPAQ5VT25 AL109659.2-201ENST00000606809 1674 ntBASIC28.73■■■□□ 2.19
CDC42BPAQ5VT25 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC28.73■■■□□ 2.19
CDC42BPAQ5VT25 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC28.73■■■□□ 2.19
CDC42BPAQ5VT25 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
CDC42BPAQ5VT25 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC28.73■■■□□ 2.19
CDC42BPAQ5VT25 LINC00265-3P-201ENST00000447588 903 ntBASIC28.73■■■□□ 2.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms