Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VPS13DQ5THJ4 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
VPS13DQ5THJ4 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VPS13DQ5THJ4 RNF126P1-202ENST00000569893 925 ntBASIC12.79□□□□□ -0.36
VPS13DQ5THJ4 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC12.79□□□□□ -0.36
VPS13DQ5THJ4 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC12.79□□□□□ -0.36
VPS13DQ5THJ4 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VPS13DQ5THJ4 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC12.78□□□□□ -0.36
VPS13DQ5THJ4 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC12.78□□□□□ -0.36
VPS13DQ5THJ4 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
VPS13DQ5THJ4 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
VPS13DQ5THJ4 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VPS13DQ5THJ4 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
VPS13DQ5THJ4 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
VPS13DQ5THJ4 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC12.78□□□□□ -0.36
VPS13DQ5THJ4 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC12.78□□□□□ -0.36
VPS13DQ5THJ4 REXO1L6P-202ENST00000619970 1078 ntBASIC12.78□□□□□ -0.36
VPS13DQ5THJ4 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
VPS13DQ5THJ4 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VPS13DQ5THJ4 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
VPS13DQ5THJ4 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VPS13DQ5THJ4 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC12.78□□□□□ -0.36
VPS13DQ5THJ4 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC12.78□□□□□ -0.36
VPS13DQ5THJ4 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
VPS13DQ5THJ4 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VPS13DQ5THJ4 AL136038.4-201ENST00000603606 1261 ntBASIC12.78□□□□□ -0.36
VPS13DQ5THJ4 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VPS13DQ5THJ4 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
VPS13DQ5THJ4 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
VPS13DQ5THJ4 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC12.78□□□□□ -0.36
VPS13DQ5THJ4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC12.78□□□□□ -0.36
VPS13DQ5THJ4 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC12.78□□□□□ -0.36
VPS13DQ5THJ4 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC12.78□□□□□ -0.36
VPS13DQ5THJ4 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VPS13DQ5THJ4 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC12.78□□□□□ -0.36
VPS13DQ5THJ4 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
VPS13DQ5THJ4 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
VPS13DQ5THJ4 LSM5-204ENST00000409909 740 ntTSL 2 BASIC12.77□□□□□ -0.36
VPS13DQ5THJ4 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC12.77□□□□□ -0.36
VPS13DQ5THJ4 PNN-202ENST00000553331 656 ntTSL 3 BASIC12.77□□□□□ -0.36
VPS13DQ5THJ4 AC012615.1-201ENST00000565797 1299 ntBASIC12.77□□□□□ -0.36
VPS13DQ5THJ4 TEX21P-204ENST00000641479 1693 ntBASIC12.77□□□□□ -0.36
VPS13DQ5THJ4 AL512353.2-201ENST00000448759 1962 ntBASIC12.77□□□□□ -0.36
VPS13DQ5THJ4 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
VPS13DQ5THJ4 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
VPS13DQ5THJ4 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC12.77□□□□□ -0.36
VPS13DQ5THJ4 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
VPS13DQ5THJ4 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
VPS13DQ5THJ4 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
VPS13DQ5THJ4 CIB2-208ENST00000560618 804 ntTSL 2 BASIC12.77□□□□□ -0.37
VPS13DQ5THJ4 CALM3-211ENST00000598871 561 ntTSL 4 BASIC12.77□□□□□ -0.37
VPS13DQ5THJ4 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC12.77□□□□□ -0.37
VPS13DQ5THJ4 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC12.77□□□□□ -0.37
VPS13DQ5THJ4 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
VPS13DQ5THJ4 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
VPS13DQ5THJ4 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC12.77□□□□□ -0.37
VPS13DQ5THJ4 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
VPS13DQ5THJ4 FICD-205ENST00000552758 603 ntTSL 2 BASIC12.77□□□□□ -0.37
VPS13DQ5THJ4 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
VPS13DQ5THJ4 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC12.77□□□□□ -0.37
VPS13DQ5THJ4 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
VPS13DQ5THJ4 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC12.77□□□□□ -0.37
VPS13DQ5THJ4 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
VPS13DQ5THJ4 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
VPS13DQ5THJ4 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
VPS13DQ5THJ4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
VPS13DQ5THJ4 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC12.76□□□□□ -0.37
VPS13DQ5THJ4 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC12.76□□□□□ -0.37
VPS13DQ5THJ4 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC12.76□□□□□ -0.37
VPS13DQ5THJ4 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC12.76□□□□□ -0.37
VPS13DQ5THJ4 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC12.76□□□□□ -0.37
VPS13DQ5THJ4 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
VPS13DQ5THJ4 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC12.76□□□□□ -0.37
VPS13DQ5THJ4 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VPS13DQ5THJ4 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
VPS13DQ5THJ4 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC12.76□□□□□ -0.37
VPS13DQ5THJ4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VPS13DQ5THJ4 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VPS13DQ5THJ4 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VPS13DQ5THJ4 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VPS13DQ5THJ4 AL662844.1-201ENST00000546340 181 ntBASIC12.76□□□□□ -0.37
VPS13DQ5THJ4 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC12.76□□□□□ -0.37
VPS13DQ5THJ4 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VPS13DQ5THJ4 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
VPS13DQ5THJ4 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC12.76□□□□□ -0.37
VPS13DQ5THJ4 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC12.76□□□□□ -0.37
VPS13DQ5THJ4 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC12.76□□□□□ -0.37
VPS13DQ5THJ4 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VPS13DQ5THJ4 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC12.76□□□□□ -0.37
VPS13DQ5THJ4 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VPS13DQ5THJ4 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VPS13DQ5THJ4 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
VPS13DQ5THJ4 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VPS13DQ5THJ4 DRAXINP1-201ENST00000437611 948 ntBASIC12.76□□□□□ -0.37
VPS13DQ5THJ4 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VPS13DQ5THJ4 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VPS13DQ5THJ4 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VPS13DQ5THJ4 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VPS13DQ5THJ4 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VPS13DQ5THJ4 AC112497.1-201ENST00000624824 639 ntBASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms