Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.26■□□□□ 0.51
PDCD4Q53EL6 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.26■□□□□ 0.51
PDCD4Q53EL6 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.26■□□□□ 0.51
PDCD4Q53EL6 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.26■□□□□ 0.51
PDCD4Q53EL6 AL137784.2-201ENST00000607332 1000 ntBASIC18.26■□□□□ 0.51
PDCD4Q53EL6 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
PDCD4Q53EL6 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PDCD4Q53EL6 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
PDCD4Q53EL6 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDCD4Q53EL6 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDCD4Q53EL6 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDCD4Q53EL6 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.26■□□□□ 0.51
PDCD4Q53EL6 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
PDCD4Q53EL6 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDCD4Q53EL6 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.25■□□□□ 0.51
PDCD4Q53EL6 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
PDCD4Q53EL6 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PDCD4Q53EL6 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDCD4Q53EL6 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDCD4Q53EL6 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.25■□□□□ 0.51
PDCD4Q53EL6 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.25■□□□□ 0.51
PDCD4Q53EL6 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDCD4Q53EL6 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.25■□□□□ 0.51
PDCD4Q53EL6 TSPY21P-201ENST00000433481 731 ntBASIC18.25■□□□□ 0.51
PDCD4Q53EL6 GUSBP6-202ENST00000438529 1198 ntBASIC18.25■□□□□ 0.51
PDCD4Q53EL6 AC006970.2-201ENST00000450065 779 ntBASIC18.25■□□□□ 0.51
PDCD4Q53EL6 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.25■□□□□ 0.51
PDCD4Q53EL6 AC097658.1-201ENST00000475555 843 ntBASIC18.25■□□□□ 0.51
PDCD4Q53EL6 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.25■□□□□ 0.51
PDCD4Q53EL6 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.25■□□□□ 0.51
PDCD4Q53EL6 MIR4758-201ENST00000577688 71 ntBASIC18.25■□□□□ 0.51
PDCD4Q53EL6 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.25■□□□□ 0.51
PDCD4Q53EL6 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.25■□□□□ 0.51
PDCD4Q53EL6 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.25■□□□□ 0.51
PDCD4Q53EL6 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.25■□□□□ 0.51
PDCD4Q53EL6 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.25■□□□□ 0.51
PDCD4Q53EL6 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.25■□□□□ 0.51
PDCD4Q53EL6 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PDCD4Q53EL6 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.25■□□□□ 0.51
PDCD4Q53EL6 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDCD4Q53EL6 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.25■□□□□ 0.51
PDCD4Q53EL6 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.25■□□□□ 0.51
PDCD4Q53EL6 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDCD4Q53EL6 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDCD4Q53EL6 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.25■□□□□ 0.51
PDCD4Q53EL6 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDCD4Q53EL6 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDCD4Q53EL6 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.25■□□□□ 0.51
PDCD4Q53EL6 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDCD4Q53EL6 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PDCD4Q53EL6 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
PDCD4Q53EL6 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDCD4Q53EL6 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
PDCD4Q53EL6 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDCD4Q53EL6 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.24■□□□□ 0.51
PDCD4Q53EL6 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.24■□□□□ 0.51
PDCD4Q53EL6 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
PDCD4Q53EL6 AL133373.2-201ENST00000623187 2828 ntBASIC18.24■□□□□ 0.51
PDCD4Q53EL6 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDCD4Q53EL6 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PDCD4Q53EL6 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDCD4Q53EL6 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PDCD4Q53EL6 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
PDCD4Q53EL6 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
PDCD4Q53EL6 SLC29A4P1-201ENST00000398760 971 ntBASIC18.24■□□□□ 0.51
PDCD4Q53EL6 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.24■□□□□ 0.51
PDCD4Q53EL6 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDCD4Q53EL6 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PDCD4Q53EL6 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDCD4Q53EL6 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
PDCD4Q53EL6 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.24■□□□□ 0.51
PDCD4Q53EL6 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PDCD4Q53EL6 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDCD4Q53EL6 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.23■□□□□ 0.51
PDCD4Q53EL6 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.23■□□□□ 0.51
PDCD4Q53EL6 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PDCD4Q53EL6 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PDCD4Q53EL6 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
PDCD4Q53EL6 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDCD4Q53EL6 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDCD4Q53EL6 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDCD4Q53EL6 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDCD4Q53EL6 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDCD4Q53EL6 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.23■□□□□ 0.51
PDCD4Q53EL6 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PDCD4Q53EL6 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDCD4Q53EL6 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDCD4Q53EL6 MIR935-201ENST00000401179 91 ntBASIC18.23■□□□□ 0.51
PDCD4Q53EL6 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.23■□□□□ 0.51
PDCD4Q53EL6 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.23■□□□□ 0.51
PDCD4Q53EL6 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.23■□□□□ 0.51
PDCD4Q53EL6 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PDCD4Q53EL6 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.23■□□□□ 0.51
PDCD4Q53EL6 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PDCD4Q53EL6 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDCD4Q53EL6 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PDCD4Q53EL6 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.23■□□□□ 0.51
PDCD4Q53EL6 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.23■□□□□ 0.51
PDCD4Q53EL6 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDCD4Q53EL6 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms