Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.23■□□□□ 0.67
KHDC1Q4VXA5 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.23■□□□□ 0.67
KHDC1Q4VXA5 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
KHDC1Q4VXA5 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.23■□□□□ 0.67
KHDC1Q4VXA5 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KHDC1Q4VXA5 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
KHDC1Q4VXA5 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
KHDC1Q4VXA5 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.23■□□□□ 0.67
KHDC1Q4VXA5 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
KHDC1Q4VXA5 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.23■□□□□ 0.67
KHDC1Q4VXA5 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.23■□□□□ 0.67
KHDC1Q4VXA5 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
KHDC1Q4VXA5 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
KHDC1Q4VXA5 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KHDC1Q4VXA5 AL135905.2-201ENST00000584934 1404 ntBASIC19.23■□□□□ 0.67
KHDC1Q4VXA5 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
KHDC1Q4VXA5 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.22■□□□□ 0.67
KHDC1Q4VXA5 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
KHDC1Q4VXA5 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
KHDC1Q4VXA5 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
KHDC1Q4VXA5 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.22■□□□□ 0.67
KHDC1Q4VXA5 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
KHDC1Q4VXA5 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
KHDC1Q4VXA5 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
KHDC1Q4VXA5 AL032819.2-201ENST00000624543 2162 ntBASIC19.22■□□□□ 0.67
KHDC1Q4VXA5 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
KHDC1Q4VXA5 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
KHDC1Q4VXA5 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
KHDC1Q4VXA5 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
KHDC1Q4VXA5 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.22■□□□□ 0.67
KHDC1Q4VXA5 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.22■□□□□ 0.67
KHDC1Q4VXA5 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KHDC1Q4VXA5 FAM197Y1-201ENST00000421178 764 ntBASIC19.22■□□□□ 0.67
KHDC1Q4VXA5 AL353807.1-201ENST00000427475 662 ntBASIC19.22■□□□□ 0.67
KHDC1Q4VXA5 TSPY7P-201ENST00000431358 1114 ntBASIC19.22■□□□□ 0.67
KHDC1Q4VXA5 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.22■□□□□ 0.67
KHDC1Q4VXA5 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.22■□□□□ 0.67
KHDC1Q4VXA5 SNORA78-201ENST00000459373 127 ntBASIC19.22■□□□□ 0.67
KHDC1Q4VXA5 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.22■□□□□ 0.67
KHDC1Q4VXA5 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.22■□□□□ 0.67
KHDC1Q4VXA5 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.22■□□□□ 0.67
KHDC1Q4VXA5 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.22■□□□□ 0.67
KHDC1Q4VXA5 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.22■□□□□ 0.67
KHDC1Q4VXA5 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KHDC1Q4VXA5 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.22■□□□□ 0.67
KHDC1Q4VXA5 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.22■□□□□ 0.67
KHDC1Q4VXA5 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
KHDC1Q4VXA5 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
KHDC1Q4VXA5 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.22■□□□□ 0.67
KHDC1Q4VXA5 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.22■□□□□ 0.67
KHDC1Q4VXA5 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KHDC1Q4VXA5 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
KHDC1Q4VXA5 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
KHDC1Q4VXA5 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.21■□□□□ 0.67
KHDC1Q4VXA5 AC009113.1-201ENST00000570267 2443 ntBASIC19.21■□□□□ 0.67
KHDC1Q4VXA5 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KHDC1Q4VXA5 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
KHDC1Q4VXA5 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.21■□□□□ 0.67
KHDC1Q4VXA5 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
KHDC1Q4VXA5 MIR718-201ENST00000390190 70 ntBASIC19.21■□□□□ 0.67
KHDC1Q4VXA5 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KHDC1Q4VXA5 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.21■□□□□ 0.67
KHDC1Q4VXA5 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.21■□□□□ 0.67
KHDC1Q4VXA5 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KHDC1Q4VXA5 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.21■□□□□ 0.67
KHDC1Q4VXA5 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.21■□□□□ 0.67
KHDC1Q4VXA5 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
KHDC1Q4VXA5 AC073195.1-201ENST00000607241 877 ntBASIC19.21■□□□□ 0.67
KHDC1Q4VXA5 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.21■□□□□ 0.67
KHDC1Q4VXA5 CROCCP3-202ENST00000420820 1947 ntBASIC19.21■□□□□ 0.67
KHDC1Q4VXA5 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.21■□□□□ 0.67
KHDC1Q4VXA5 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.21■□□□□ 0.67
KHDC1Q4VXA5 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KHDC1Q4VXA5 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
KHDC1Q4VXA5 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
KHDC1Q4VXA5 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.2■□□□□ 0.66
KHDC1Q4VXA5 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KHDC1Q4VXA5 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
KHDC1Q4VXA5 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
KHDC1Q4VXA5 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
KHDC1Q4VXA5 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
KHDC1Q4VXA5 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
KHDC1Q4VXA5 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KHDC1Q4VXA5 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.2■□□□□ 0.66
KHDC1Q4VXA5 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KHDC1Q4VXA5 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KHDC1Q4VXA5 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
KHDC1Q4VXA5 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
KHDC1Q4VXA5 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
KHDC1Q4VXA5 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
KHDC1Q4VXA5 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.2■□□□□ 0.66
KHDC1Q4VXA5 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.2■□□□□ 0.66
KHDC1Q4VXA5 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.2■□□□□ 0.66
KHDC1Q4VXA5 CD177P1-201ENST00000606252 935 ntBASIC19.2■□□□□ 0.66
KHDC1Q4VXA5 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.2■□□□□ 0.66
KHDC1Q4VXA5 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.2■□□□□ 0.66
KHDC1Q4VXA5 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.2■□□□□ 0.66
KHDC1Q4VXA5 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KHDC1Q4VXA5 AL390961.4-201ENST00000623958 2535 ntBASIC19.2■□□□□ 0.66
KHDC1Q4VXA5 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms