Protein–RNA interactions for Protein: Q0VAM2

RASGEF1B, Ras-GEF domain-containing family member 1B, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1BQ0VAM2 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RASGEF1BQ0VAM2 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.27■□□□□ 0.36
RASGEF1BQ0VAM2 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
RASGEF1BQ0VAM2 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RASGEF1BQ0VAM2 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RASGEF1BQ0VAM2 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
RASGEF1BQ0VAM2 TSPY7P-201ENST00000431358 1114 ntBASIC17.27■□□□□ 0.36
RASGEF1BQ0VAM2 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.27■□□□□ 0.36
RASGEF1BQ0VAM2 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.27■□□□□ 0.36
RASGEF1BQ0VAM2 MIR4497-201ENST00000583208 89 ntBASIC17.27■□□□□ 0.36
RASGEF1BQ0VAM2 AL031985.4-201ENST00000642138 673 ntBASIC17.27■□□□□ 0.36
RASGEF1BQ0VAM2 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RASGEF1BQ0VAM2 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RASGEF1BQ0VAM2 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RASGEF1BQ0VAM2 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
RASGEF1BQ0VAM2 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RASGEF1BQ0VAM2 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RASGEF1BQ0VAM2 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RASGEF1BQ0VAM2 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RASGEF1BQ0VAM2 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RASGEF1BQ0VAM2 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RASGEF1BQ0VAM2 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RASGEF1BQ0VAM2 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RASGEF1BQ0VAM2 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RASGEF1BQ0VAM2 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RASGEF1BQ0VAM2 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
RASGEF1BQ0VAM2 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RASGEF1BQ0VAM2 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.26■□□□□ 0.35
RASGEF1BQ0VAM2 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.26■□□□□ 0.35
RASGEF1BQ0VAM2 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RASGEF1BQ0VAM2 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.26■□□□□ 0.35
RASGEF1BQ0VAM2 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
RASGEF1BQ0VAM2 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RASGEF1BQ0VAM2 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RASGEF1BQ0VAM2 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RASGEF1BQ0VAM2 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.26■□□□□ 0.35
RASGEF1BQ0VAM2 AL596275.1-201ENST00000423464 877 ntBASIC17.26■□□□□ 0.35
RASGEF1BQ0VAM2 AL355355.2-201ENST00000442321 338 ntBASIC17.26■□□□□ 0.35
RASGEF1BQ0VAM2 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.26■□□□□ 0.35
RASGEF1BQ0VAM2 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.26■□□□□ 0.35
RASGEF1BQ0VAM2 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RASGEF1BQ0VAM2 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.26■□□□□ 0.35
RASGEF1BQ0VAM2 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
RASGEF1BQ0VAM2 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.26■□□□□ 0.35
RASGEF1BQ0VAM2 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RASGEF1BQ0VAM2 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RASGEF1BQ0VAM2 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.26■□□□□ 0.35
RASGEF1BQ0VAM2 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RASGEF1BQ0VAM2 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
RASGEF1BQ0VAM2 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RASGEF1BQ0VAM2 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RASGEF1BQ0VAM2 KRT17P2-201ENST00000300992 1314 ntBASIC17.25■□□□□ 0.35
RASGEF1BQ0VAM2 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RASGEF1BQ0VAM2 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RASGEF1BQ0VAM2 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RASGEF1BQ0VAM2 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RASGEF1BQ0VAM2 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RASGEF1BQ0VAM2 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RASGEF1BQ0VAM2 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RASGEF1BQ0VAM2 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
RASGEF1BQ0VAM2 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.25■□□□□ 0.35
RASGEF1BQ0VAM2 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.25■□□□□ 0.35
RASGEF1BQ0VAM2 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.25■□□□□ 0.35
RASGEF1BQ0VAM2 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RASGEF1BQ0VAM2 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
RASGEF1BQ0VAM2 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RASGEF1BQ0VAM2 AL160286.2-201ENST00000567150 934 ntBASIC17.25■□□□□ 0.35
RASGEF1BQ0VAM2 MIR4785-201ENST00000585005 73 ntBASIC17.25■□□□□ 0.35
RASGEF1BQ0VAM2 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RASGEF1BQ0VAM2 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RASGEF1BQ0VAM2 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
RASGEF1BQ0VAM2 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
RASGEF1BQ0VAM2 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
RASGEF1BQ0VAM2 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
RASGEF1BQ0VAM2 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
RASGEF1BQ0VAM2 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
RASGEF1BQ0VAM2 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RASGEF1BQ0VAM2 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
RASGEF1BQ0VAM2 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
RASGEF1BQ0VAM2 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
RASGEF1BQ0VAM2 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.25■□□□□ 0.35
RASGEF1BQ0VAM2 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RASGEF1BQ0VAM2 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RASGEF1BQ0VAM2 ZNF815P-204ENST00000434898 1737 ntBASIC17.24■□□□□ 0.35
RASGEF1BQ0VAM2 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RASGEF1BQ0VAM2 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RASGEF1BQ0VAM2 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RASGEF1BQ0VAM2 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RASGEF1BQ0VAM2 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RASGEF1BQ0VAM2 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RASGEF1BQ0VAM2 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RASGEF1BQ0VAM2 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RASGEF1BQ0VAM2 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.24■□□□□ 0.35
RASGEF1BQ0VAM2 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.24■□□□□ 0.35
RASGEF1BQ0VAM2 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RASGEF1BQ0VAM2 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RASGEF1BQ0VAM2 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RASGEF1BQ0VAM2 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.24■□□□□ 0.35
RASGEF1BQ0VAM2 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.24■□□□□ 0.35
RASGEF1BQ0VAM2 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms