Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H1AQ02539 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H1AQ02539 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
HIST1H1AQ02539 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC14.54□□□□□ -0.08
HIST1H1AQ02539 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
HIST1H1AQ02539 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC14.54□□□□□ -0.08
HIST1H1AQ02539 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H1AQ02539 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
HIST1H1AQ02539 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H1AQ02539 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
HIST1H1AQ02539 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
HIST1H1AQ02539 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H1AQ02539 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H1AQ02539 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
HIST1H1AQ02539 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H1AQ02539 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H1AQ02539 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H1AQ02539 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC14.53□□□□□ -0.08
HIST1H1AQ02539 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
HIST1H1AQ02539 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H1AQ02539 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC14.53□□□□□ -0.08
HIST1H1AQ02539 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC14.53□□□□□ -0.08
HIST1H1AQ02539 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC14.53□□□□□ -0.08
HIST1H1AQ02539 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC14.53□□□□□ -0.08
HIST1H1AQ02539 AC098934.4-201ENST00000564127 592 ntBASIC14.53□□□□□ -0.08
HIST1H1AQ02539 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC14.53□□□□□ -0.08
HIST1H1AQ02539 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC14.53□□□□□ -0.08
HIST1H1AQ02539 MYC-209ENST00000641252 345 ntBASIC14.53□□□□□ -0.08
HIST1H1AQ02539 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H1AQ02539 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H1AQ02539 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.53□□□□□ -0.08
HIST1H1AQ02539 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H1AQ02539 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H1AQ02539 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H1AQ02539 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H1AQ02539 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
HIST1H1AQ02539 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
HIST1H1AQ02539 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H1AQ02539 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC14.53□□□□□ -0.08
HIST1H1AQ02539 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
HIST1H1AQ02539 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC14.53□□□□□ -0.08
HIST1H1AQ02539 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HIST1H1AQ02539 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HIST1H1AQ02539 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
HIST1H1AQ02539 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
HIST1H1AQ02539 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HIST1H1AQ02539 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HIST1H1AQ02539 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
HIST1H1AQ02539 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HIST1H1AQ02539 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
HIST1H1AQ02539 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
HIST1H1AQ02539 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HIST1H1AQ02539 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
HIST1H1AQ02539 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
HIST1H1AQ02539 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
HIST1H1AQ02539 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HIST1H1AQ02539 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC14.52□□□□□ -0.09
HIST1H1AQ02539 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
HIST1H1AQ02539 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC14.52□□□□□ -0.09
HIST1H1AQ02539 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC14.52□□□□□ -0.09
HIST1H1AQ02539 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
HIST1H1AQ02539 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC14.52□□□□□ -0.09
HIST1H1AQ02539 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC14.52□□□□□ -0.09
HIST1H1AQ02539 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HIST1H1AQ02539 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC14.52□□□□□ -0.09
HIST1H1AQ02539 PNN-205ENST00000556530 601 ntTSL 2 BASIC14.52□□□□□ -0.09
HIST1H1AQ02539 MAX-217ENST00000557277 728 ntTSL 3 BASIC14.52□□□□□ -0.09
HIST1H1AQ02539 SOX15-203ENST00000570788 1093 ntBASIC14.52□□□□□ -0.09
HIST1H1AQ02539 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC14.52□□□□□ -0.09
HIST1H1AQ02539 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC14.52□□□□□ -0.09
HIST1H1AQ02539 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC14.52□□□□□ -0.09
HIST1H1AQ02539 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HIST1H1AQ02539 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HIST1H1AQ02539 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HIST1H1AQ02539 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HIST1H1AQ02539 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HIST1H1AQ02539 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HIST1H1AQ02539 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC14.52□□□□□ -0.09
HIST1H1AQ02539 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC14.51□□□□□ -0.09
HIST1H1AQ02539 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HIST1H1AQ02539 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC14.51□□□□□ -0.09
HIST1H1AQ02539 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HIST1H1AQ02539 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC14.51□□□□□ -0.09
HIST1H1AQ02539 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
HIST1H1AQ02539 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HIST1H1AQ02539 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC14.51□□□□□ -0.09
HIST1H1AQ02539 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
HIST1H1AQ02539 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC14.51□□□□□ -0.09
HIST1H1AQ02539 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
HIST1H1AQ02539 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
HIST1H1AQ02539 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HIST1H1AQ02539 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
HIST1H1AQ02539 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HIST1H1AQ02539 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HIST1H1AQ02539 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HIST1H1AQ02539 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
HIST1H1AQ02539 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HIST1H1AQ02539 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HIST1H1AQ02539 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
HIST1H1AQ02539 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms