Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.72■□□□□ 0.27
NKX6-1P78426 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
NKX6-1P78426 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NKX6-1P78426 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NKX6-1P78426 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
NKX6-1P78426 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NKX6-1P78426 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NKX6-1P78426 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NKX6-1P78426 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NKX6-1P78426 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC16.72■□□□□ 0.27
NKX6-1P78426 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NKX6-1P78426 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC16.72■□□□□ 0.27
NKX6-1P78426 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
NKX6-1P78426 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
NKX6-1P78426 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NKX6-1P78426 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NKX6-1P78426 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
NKX6-1P78426 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
NKX6-1P78426 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.72■□□□□ 0.27
NKX6-1P78426 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.72■□□□□ 0.27
NKX6-1P78426 BX664615.1-201ENST00000443558 458 ntBASIC16.72■□□□□ 0.27
NKX6-1P78426 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.72■□□□□ 0.27
NKX6-1P78426 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.72■□□□□ 0.27
NKX6-1P78426 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NKX6-1P78426 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.72■□□□□ 0.27
NKX6-1P78426 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NKX6-1P78426 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.72■□□□□ 0.27
NKX6-1P78426 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.72■□□□□ 0.27
NKX6-1P78426 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NKX6-1P78426 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NKX6-1P78426 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NKX6-1P78426 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.72■□□□□ 0.27
NKX6-1P78426 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NKX6-1P78426 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NKX6-1P78426 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NKX6-1P78426 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NKX6-1P78426 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NKX6-1P78426 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NKX6-1P78426 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
NKX6-1P78426 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
NKX6-1P78426 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NKX6-1P78426 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NKX6-1P78426 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NKX6-1P78426 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.71■□□□□ 0.27
NKX6-1P78426 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16.71■□□□□ 0.27
NKX6-1P78426 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.71■□□□□ 0.27
NKX6-1P78426 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
NKX6-1P78426 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NKX6-1P78426 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NKX6-1P78426 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NKX6-1P78426 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.71■□□□□ 0.27
NKX6-1P78426 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
NKX6-1P78426 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NKX6-1P78426 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NKX6-1P78426 TSPY14P-201ENST00000303979 915 ntBASIC16.71■□□□□ 0.27
NKX6-1P78426 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.71■□□□□ 0.27
NKX6-1P78426 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.71■□□□□ 0.27
NKX6-1P78426 AP005242.2-201ENST00000580065 1175 ntBASIC16.71■□□□□ 0.27
NKX6-1P78426 AC131212.4-201ENST00000623606 975 ntBASIC16.71■□□□□ 0.27
NKX6-1P78426 AL358472.4-201ENST00000633140 710 ntBASIC16.71■□□□□ 0.27
NKX6-1P78426 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NKX6-1P78426 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.71■□□□□ 0.27
NKX6-1P78426 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
NKX6-1P78426 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
NKX6-1P78426 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NKX6-1P78426 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
NKX6-1P78426 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
NKX6-1P78426 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
NKX6-1P78426 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
NKX6-1P78426 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.71■□□□□ 0.26
NKX6-1P78426 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.71■□□□□ 0.26
NKX6-1P78426 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
NKX6-1P78426 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
NKX6-1P78426 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NKX6-1P78426 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NKX6-1P78426 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NKX6-1P78426 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
NKX6-1P78426 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
NKX6-1P78426 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NKX6-1P78426 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NKX6-1P78426 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NKX6-1P78426 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.7■□□□□ 0.26
NKX6-1P78426 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC16.7■□□□□ 0.26
NKX6-1P78426 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NKX6-1P78426 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.7■□□□□ 0.26
NKX6-1P78426 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NKX6-1P78426 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
NKX6-1P78426 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
NKX6-1P78426 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NKX6-1P78426 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NKX6-1P78426 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NKX6-1P78426 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.7■□□□□ 0.26
NKX6-1P78426 CRYGFP-201ENST00000418459 633 ntBASIC16.7■□□□□ 0.26
NKX6-1P78426 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NKX6-1P78426 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NKX6-1P78426 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
NKX6-1P78426 AC022616.7-201ENST00000525383 220 ntBASIC16.7■□□□□ 0.26
NKX6-1P78426 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.7■□□□□ 0.26
NKX6-1P78426 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NKX6-1P78426 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms