Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP46P62068 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
USP46P62068 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP46P62068 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP46P62068 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.98■□□□□ 0.79
USP46P62068 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
USP46P62068 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.98■□□□□ 0.79
USP46P62068 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP46P62068 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
USP46P62068 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP46P62068 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP46P62068 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP46P62068 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
USP46P62068 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.98■□□□□ 0.79
USP46P62068 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP46P62068 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP46P62068 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.97■□□□□ 0.79
USP46P62068 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.97■□□□□ 0.79
USP46P62068 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP46P62068 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
USP46P62068 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
USP46P62068 AC026471.1-201ENST00000564629 3026 ntBASIC19.97■□□□□ 0.79
USP46P62068 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP46P62068 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP46P62068 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP46P62068 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
USP46P62068 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.97■□□□□ 0.79
USP46P62068 AC117947.1-201ENST00000427448 529 ntBASIC19.97■□□□□ 0.79
USP46P62068 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
USP46P62068 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.97■□□□□ 0.79
USP46P62068 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.97■□□□□ 0.79
USP46P62068 MIR4674-201ENST00000582457 87 ntBASIC19.97■□□□□ 0.79
USP46P62068 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.97■□□□□ 0.79
USP46P62068 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
USP46P62068 AC008622.2-201ENST00000617006 1229 ntBASIC19.97■□□□□ 0.79
USP46P62068 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP46P62068 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP46P62068 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.97■□□□□ 0.79
USP46P62068 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP46P62068 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP46P62068 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
USP46P62068 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
USP46P62068 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
USP46P62068 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP46P62068 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP46P62068 KRT8P45-201ENST00000414328 1447 ntBASIC19.96■□□□□ 0.79
USP46P62068 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
USP46P62068 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
USP46P62068 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
USP46P62068 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP46P62068 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP46P62068 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.96■□□□□ 0.79
USP46P62068 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.96■□□□□ 0.79
USP46P62068 BX664615.1-201ENST00000443558 458 ntBASIC19.96■□□□□ 0.79
USP46P62068 WWOX-216ENST00000569818 525 ntBASIC19.96■□□□□ 0.79
USP46P62068 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.96■□□□□ 0.79
USP46P62068 AC139887.4-201ENST00000607877 719 ntBASIC19.96■□□□□ 0.79
USP46P62068 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
USP46P62068 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP46P62068 TEX21P-204ENST00000641479 1693 ntBASIC19.96■□□□□ 0.79
USP46P62068 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
USP46P62068 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
USP46P62068 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP46P62068 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
USP46P62068 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.95■□□□□ 0.78
USP46P62068 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.95■□□□□ 0.78
USP46P62068 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP46P62068 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP46P62068 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP46P62068 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
USP46P62068 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP46P62068 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP46P62068 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP46P62068 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
USP46P62068 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP46P62068 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.95■□□□□ 0.78
USP46P62068 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
USP46P62068 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
USP46P62068 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
USP46P62068 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.95■□□□□ 0.78
USP46P62068 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
USP46P62068 AC141257.4-201ENST00000634557 245 ntBASIC19.95■□□□□ 0.78
USP46P62068 AC136944.6-201ENST00000634818 245 ntBASIC19.95■□□□□ 0.78
USP46P62068 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP46P62068 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP46P62068 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
USP46P62068 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
USP46P62068 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP46P62068 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP46P62068 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
USP46P62068 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP46P62068 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP46P62068 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.95■□□□□ 0.78
USP46P62068 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
USP46P62068 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP46P62068 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
USP46P62068 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.95■□□□□ 0.78
USP46P62068 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
USP46P62068 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP46P62068 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms