Protein–RNA interactions for Protein: P55084

HADHB, Trifunctional enzyme subunit beta, mitochondrial, humanhuman

Known RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHBP55084 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HADHBP55084 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
HADHBP55084 KRT8P11-201ENST00000409686 1436 ntBASIC19.92■□□□□ 0.78
HADHBP55084 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.92■□□□□ 0.78
HADHBP55084 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.92■□□□□ 0.78
HADHBP55084 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
HADHBP55084 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.92■□□□□ 0.78
HADHBP55084 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
HADHBP55084 AL162741.1-201ENST00000565563 1558 ntBASIC19.91■□□□□ 0.78
HADHBP55084 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HADHBP55084 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HADHBP55084 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HADHBP55084 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.91■□□□□ 0.78
HADHBP55084 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HADHBP55084 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.91■□□□□ 0.78
HADHBP55084 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HADHBP55084 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HADHBP55084 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
HADHBP55084 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HADHBP55084 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.91■□□□□ 0.78
HADHBP55084 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
HADHBP55084 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
HADHBP55084 PRSS44-201ENST00000515154 1146 ntBASIC19.91■□□□□ 0.78
HADHBP55084 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.91■□□□□ 0.78
HADHBP55084 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.91■□□□□ 0.78
HADHBP55084 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HADHBP55084 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.91■□□□□ 0.78
HADHBP55084 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HADHBP55084 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
HADHBP55084 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HADHBP55084 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.91■□□□□ 0.78
HADHBP55084 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
HADHBP55084 KRT8P32-201ENST00000512863 1461 ntBASIC19.91■□□□□ 0.78
HADHBP55084 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.91■□□□□ 0.78
HADHBP55084 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.91■□□□□ 0.78
HADHBP55084 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.91■□□□□ 0.78
HADHBP55084 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HADHBP55084 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HADHBP55084 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HADHBP55084 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HADHBP55084 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.9■□□□□ 0.78
HADHBP55084 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
HADHBP55084 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.9■□□□□ 0.78
HADHBP55084 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.9■□□□□ 0.78
HADHBP55084 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.9■□□□□ 0.78
HADHBP55084 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
HADHBP55084 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HADHBP55084 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HADHBP55084 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HADHBP55084 NOC2LP1-202ENST00000452600 2235 ntBASIC19.9■□□□□ 0.78
HADHBP55084 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HADHBP55084 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HADHBP55084 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HADHBP55084 KRASP1-201ENST00000407852 552 ntBASIC19.9■□□□□ 0.78
HADHBP55084 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.9■□□□□ 0.78
HADHBP55084 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
HADHBP55084 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.9■□□□□ 0.78
HADHBP55084 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.9■□□□□ 0.78
HADHBP55084 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
HADHBP55084 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.9■□□□□ 0.78
HADHBP55084 AL023875.1-201ENST00000640777 796 ntBASIC19.9■□□□□ 0.78
HADHBP55084 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.9■□□□□ 0.78
HADHBP55084 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HADHBP55084 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HADHBP55084 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HADHBP55084 KRT8P3-201ENST00000519669 1449 ntBASIC19.9■□□□□ 0.78
HADHBP55084 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HADHBP55084 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HADHBP55084 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
HADHBP55084 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HADHBP55084 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
HADHBP55084 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.9■□□□□ 0.78
HADHBP55084 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.9■□□□□ 0.78
HADHBP55084 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
HADHBP55084 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.9■□□□□ 0.78
HADHBP55084 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HADHBP55084 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
HADHBP55084 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HADHBP55084 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
HADHBP55084 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HADHBP55084 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HADHBP55084 AC239809.2-201ENST00000415381 517 ntBASIC19.89■□□□□ 0.77
HADHBP55084 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.89■□□□□ 0.77
HADHBP55084 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.89■□□□□ 0.77
HADHBP55084 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.89■□□□□ 0.77
HADHBP55084 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.89■□□□□ 0.77
HADHBP55084 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HADHBP55084 RNA5SP413-201ENST00000516373 109 ntBASIC19.89■□□□□ 0.77
HADHBP55084 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HADHBP55084 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
HADHBP55084 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.89■□□□□ 0.77
HADHBP55084 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HADHBP55084 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.89■□□□□ 0.77
HADHBP55084 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.89■□□□□ 0.77
HADHBP55084 AC007613.1-201ENST00000572811 2597 ntBASIC19.89■□□□□ 0.77
HADHBP55084 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HADHBP55084 AC124016.1-201ENST00000609552 612 ntBASIC19.89■□□□□ 0.77
HADHBP55084 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.89■□□□□ 0.77
HADHBP55084 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HADHBP55084 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms