Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
EPHB3P54753 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.84■□□□□ 0.77
EPHB3P54753 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
EPHB3P54753 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
EPHB3P54753 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
EPHB3P54753 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.84■□□□□ 0.77
EPHB3P54753 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
EPHB3P54753 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
EPHB3P54753 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
EPHB3P54753 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
EPHB3P54753 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.84■□□□□ 0.77
EPHB3P54753 VENTXP5-201ENST00000523979 775 ntBASIC19.84■□□□□ 0.77
EPHB3P54753 MIR3180-5-201ENST00000583743 153 ntBASIC19.84■□□□□ 0.77
EPHB3P54753 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.84■□□□□ 0.77
EPHB3P54753 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
EPHB3P54753 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
EPHB3P54753 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
EPHB3P54753 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.84■□□□□ 0.77
EPHB3P54753 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.84■□□□□ 0.77
EPHB3P54753 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
EPHB3P54753 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
EPHB3P54753 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
EPHB3P54753 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
EPHB3P54753 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
EPHB3P54753 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
EPHB3P54753 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.84■□□□□ 0.77
EPHB3P54753 LINC01311-201ENST00000565162 1445 ntBASIC19.84■□□□□ 0.77
EPHB3P54753 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
EPHB3P54753 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
EPHB3P54753 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
EPHB3P54753 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
EPHB3P54753 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
EPHB3P54753 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
EPHB3P54753 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.83■□□□□ 0.77
EPHB3P54753 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
EPHB3P54753 AC036111.1-201ENST00000533973 1582 ntBASIC19.83■□□□□ 0.77
EPHB3P54753 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
EPHB3P54753 AC005332.1-201ENST00000577698 1310 ntBASIC19.83■□□□□ 0.77
EPHB3P54753 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.83■□□□□ 0.77
EPHB3P54753 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
EPHB3P54753 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
EPHB3P54753 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
EPHB3P54753 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
EPHB3P54753 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
EPHB3P54753 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.83■□□□□ 0.77
EPHB3P54753 AC034232.1-201ENST00000506026 1064 ntBASIC19.83■□□□□ 0.77
EPHB3P54753 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.83■□□□□ 0.77
EPHB3P54753 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.83■□□□□ 0.77
EPHB3P54753 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.83■□□□□ 0.77
EPHB3P54753 ZNF444P1-201ENST00000559497 298 ntBASIC19.83■□□□□ 0.77
EPHB3P54753 AL136038.3-201ENST00000561909 1096 ntBASIC19.83■□□□□ 0.77
EPHB3P54753 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
EPHB3P54753 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.83■□□□□ 0.77
EPHB3P54753 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.83■□□□□ 0.77
EPHB3P54753 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
EPHB3P54753 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.83■□□□□ 0.76
EPHB3P54753 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.83■□□□□ 0.76
EPHB3P54753 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
EPHB3P54753 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
EPHB3P54753 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.83■□□□□ 0.76
EPHB3P54753 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
EPHB3P54753 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
EPHB3P54753 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
EPHB3P54753 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
EPHB3P54753 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.82■□□□□ 0.76
EPHB3P54753 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
EPHB3P54753 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
EPHB3P54753 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
EPHB3P54753 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
EPHB3P54753 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
EPHB3P54753 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
EPHB3P54753 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
EPHB3P54753 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
EPHB3P54753 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
EPHB3P54753 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
EPHB3P54753 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.82■□□□□ 0.76
EPHB3P54753 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.82■□□□□ 0.76
EPHB3P54753 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.82■□□□□ 0.76
EPHB3P54753 AC116407.4-201ENST00000623319 1061 ntBASIC19.82■□□□□ 0.76
EPHB3P54753 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
EPHB3P54753 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
EPHB3P54753 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
EPHB3P54753 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
EPHB3P54753 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
EPHB3P54753 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
EPHB3P54753 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
EPHB3P54753 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
EPHB3P54753 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
EPHB3P54753 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
EPHB3P54753 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
EPHB3P54753 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
EPHB3P54753 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
EPHB3P54753 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
EPHB3P54753 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
EPHB3P54753 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
EPHB3P54753 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
EPHB3P54753 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
EPHB3P54753 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.81■□□□□ 0.76
EPHB3P54753 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.81■□□□□ 0.76
EPHB3P54753 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms