Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 AC012615.1-201ENST00000565797 1299 ntBASIC20.95■□□□□ 0.94
ACLYP53396 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
ACLYP53396 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC20.95■□□□□ 0.94
ACLYP53396 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ACLYP53396 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
ACLYP53396 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ACLYP53396 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
ACLYP53396 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ACLYP53396 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
ACLYP53396 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.95■□□□□ 0.94
ACLYP53396 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ACLYP53396 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
ACLYP53396 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
ACLYP53396 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.94■□□□□ 0.94
ACLYP53396 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
ACLYP53396 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ACLYP53396 TOB2P1-201ENST00000469761 992 ntBASIC20.94■□□□□ 0.94
ACLYP53396 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.94■□□□□ 0.94
ACLYP53396 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.94■□□□□ 0.94
ACLYP53396 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ACLYP53396 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ACLYP53396 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ACLYP53396 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ACLYP53396 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ACLYP53396 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
ACLYP53396 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ACLYP53396 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ACLYP53396 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ACLYP53396 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ACLYP53396 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.93■□□□□ 0.94
ACLYP53396 AL022342.1-201ENST00000400363 863 ntBASIC20.93■□□□□ 0.94
ACLYP53396 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.93■□□□□ 0.94
ACLYP53396 KRT18P31-201ENST00000506277 1292 ntBASIC20.93■□□□□ 0.94
ACLYP53396 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ACLYP53396 LINC01711-201ENST00000598340 967 ntBASIC20.93■□□□□ 0.94
ACLYP53396 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ACLYP53396 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ACLYP53396 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20.93■□□□□ 0.94
ACLYP53396 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
ACLYP53396 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.93■□□□□ 0.94
ACLYP53396 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.93■□□□□ 0.94
ACLYP53396 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ACLYP53396 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
ACLYP53396 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ACLYP53396 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ACLYP53396 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ACLYP53396 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ACLYP53396 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ACLYP53396 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ACLYP53396 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ACLYP53396 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
ACLYP53396 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.92■□□□□ 0.94
ACLYP53396 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20.92■□□□□ 0.94
ACLYP53396 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.92■□□□□ 0.94
ACLYP53396 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.92■□□□□ 0.94
ACLYP53396 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ACLYP53396 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ACLYP53396 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
ACLYP53396 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.92■□□□□ 0.94
ACLYP53396 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ACLYP53396 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
ACLYP53396 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.92■□□□□ 0.94
ACLYP53396 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ACLYP53396 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.92■□□□□ 0.94
ACLYP53396 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ACLYP53396 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ACLYP53396 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
ACLYP53396 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
ACLYP53396 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
ACLYP53396 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ACLYP53396 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ACLYP53396 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.91■□□□□ 0.94
ACLYP53396 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ACLYP53396 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
ACLYP53396 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ACLYP53396 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
ACLYP53396 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.91■□□□□ 0.94
ACLYP53396 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.91■□□□□ 0.94
ACLYP53396 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ACLYP53396 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.91■□□□□ 0.94
ACLYP53396 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ACLYP53396 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ACLYP53396 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
ACLYP53396 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.9■□□□□ 0.94
ACLYP53396 AC099778.1-201ENST00000568593 1911 ntBASIC20.9■□□□□ 0.94
ACLYP53396 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
ACLYP53396 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ACLYP53396 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ACLYP53396 GABARAPL3-202ENST00000624044 1851 ntBASIC20.9■□□□□ 0.94
ACLYP53396 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ACLYP53396 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.9■□□□□ 0.94
ACLYP53396 Z83836.1-201ENST00000624605 1642 ntBASIC20.9■□□□□ 0.94
ACLYP53396 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.9■□□□□ 0.94
ACLYP53396 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.9■□□□□ 0.94
ACLYP53396 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.9■□□□□ 0.94
ACLYP53396 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ACLYP53396 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.9■□□□□ 0.94
ACLYP53396 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.9■□□□□ 0.94
ACLYP53396 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.9■□□□□ 0.94
ACLYP53396 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms