Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.36■□□□□ 0.37
HMGA2P52926 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.36■□□□□ 0.37
HMGA2P52926 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMGA2P52926 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HMGA2P52926 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
HMGA2P52926 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMGA2P52926 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.36■□□□□ 0.37
HMGA2P52926 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
HMGA2P52926 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
HMGA2P52926 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMGA2P52926 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HMGA2P52926 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.36■□□□□ 0.37
HMGA2P52926 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
HMGA2P52926 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
HMGA2P52926 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMGA2P52926 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.36■□□□□ 0.37
HMGA2P52926 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.36■□□□□ 0.37
HMGA2P52926 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.36■□□□□ 0.37
HMGA2P52926 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMGA2P52926 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HMGA2P52926 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.36■□□□□ 0.37
HMGA2P52926 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMGA2P52926 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMGA2P52926 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
HMGA2P52926 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.35■□□□□ 0.37
HMGA2P52926 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGA2P52926 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HMGA2P52926 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.35■□□□□ 0.37
HMGA2P52926 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HMGA2P52926 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGA2P52926 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGA2P52926 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGA2P52926 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGA2P52926 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGA2P52926 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGA2P52926 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGA2P52926 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGA2P52926 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGA2P52926 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGA2P52926 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGA2P52926 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGA2P52926 GUSBP6-202ENST00000438529 1198 ntBASIC17.35■□□□□ 0.37
HMGA2P52926 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.35■□□□□ 0.37
HMGA2P52926 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGA2P52926 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.35■□□□□ 0.37
HMGA2P52926 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.35■□□□□ 0.37
HMGA2P52926 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.35■□□□□ 0.37
HMGA2P52926 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGA2P52926 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.35■□□□□ 0.37
HMGA2P52926 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
HMGA2P52926 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.35■□□□□ 0.37
HMGA2P52926 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
HMGA2P52926 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HMGA2P52926 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.35■□□□□ 0.37
HMGA2P52926 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGA2P52926 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.35■□□□□ 0.37
HMGA2P52926 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HMGA2P52926 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGA2P52926 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.35■□□□□ 0.37
HMGA2P52926 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HMGA2P52926 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HMGA2P52926 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGA2P52926 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGA2P52926 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGA2P52926 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGA2P52926 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGA2P52926 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGA2P52926 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.35■□□□□ 0.37
HMGA2P52926 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HMGA2P52926 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGA2P52926 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMGA2P52926 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGA2P52926 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGA2P52926 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGA2P52926 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGA2P52926 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMGA2P52926 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.34■□□□□ 0.37
HMGA2P52926 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGA2P52926 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
HMGA2P52926 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMGA2P52926 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGA2P52926 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGA2P52926 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.34■□□□□ 0.37
HMGA2P52926 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.34■□□□□ 0.37
HMGA2P52926 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.34■□□□□ 0.37
HMGA2P52926 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.34■□□□□ 0.37
HMGA2P52926 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMGA2P52926 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.34■□□□□ 0.37
HMGA2P52926 RCC2P6-201ENST00000526625 1557 ntBASIC17.34■□□□□ 0.37
HMGA2P52926 AC008687.6-201ENST00000596318 630 ntBASIC17.34■□□□□ 0.37
HMGA2P52926 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.34■□□□□ 0.37
HMGA2P52926 HLA-A-209ENST00000638375 975 ntBASIC17.34■□□□□ 0.37
HMGA2P52926 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
HMGA2P52926 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.33■□□□□ 0.37
HMGA2P52926 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HMGA2P52926 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HMGA2P52926 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
HMGA2P52926 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HMGA2P52926 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HMGA2P52926 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms