Protein–RNA interactions for Protein: P52799

EFNB2, Ephrin-B2, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB2P52799 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
EFNB2P52799 AC067852.2-201ENST00000590513 2313 ntBASIC16.42■□□□□ 0.22
EFNB2P52799 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
EFNB2P52799 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
EFNB2P52799 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.42■□□□□ 0.22
EFNB2P52799 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
EFNB2P52799 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
EFNB2P52799 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
EFNB2P52799 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.42■□□□□ 0.22
EFNB2P52799 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
EFNB2P52799 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
EFNB2P52799 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
EFNB2P52799 POU5F1P3-201ENST00000428824 1078 ntBASIC16.42■□□□□ 0.22
EFNB2P52799 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
EFNB2P52799 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
EFNB2P52799 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
EFNB2P52799 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
EFNB2P52799 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
EFNB2P52799 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
EFNB2P52799 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
EFNB2P52799 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
EFNB2P52799 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
EFNB2P52799 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
EFNB2P52799 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
EFNB2P52799 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
EFNB2P52799 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
EFNB2P52799 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
EFNB2P52799 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
EFNB2P52799 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
EFNB2P52799 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
EFNB2P52799 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.41■□□□□ 0.22
EFNB2P52799 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
EFNB2P52799 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
EFNB2P52799 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
EFNB2P52799 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
EFNB2P52799 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.41■□□□□ 0.22
EFNB2P52799 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
EFNB2P52799 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
EFNB2P52799 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.41■□□□□ 0.22
EFNB2P52799 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
EFNB2P52799 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
EFNB2P52799 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
EFNB2P52799 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
EFNB2P52799 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
EFNB2P52799 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
EFNB2P52799 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
EFNB2P52799 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
EFNB2P52799 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
EFNB2P52799 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
EFNB2P52799 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.41■□□□□ 0.22
EFNB2P52799 AC097658.1-201ENST00000475555 843 ntBASIC16.41■□□□□ 0.22
EFNB2P52799 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
EFNB2P52799 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.41■□□□□ 0.22
EFNB2P52799 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC16.41■□□□□ 0.22
EFNB2P52799 AC083880.1-201ENST00000608266 535 ntBASIC16.41■□□□□ 0.22
EFNB2P52799 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
EFNB2P52799 FEM1AP3-201ENST00000403722 1741 ntBASIC16.41■□□□□ 0.22
EFNB2P52799 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
EFNB2P52799 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
EFNB2P52799 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
EFNB2P52799 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
EFNB2P52799 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.41■□□□□ 0.22
EFNB2P52799 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
EFNB2P52799 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
EFNB2P52799 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.41■□□□□ 0.22
EFNB2P52799 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
EFNB2P52799 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
EFNB2P52799 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.4■□□□□ 0.22
EFNB2P52799 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
EFNB2P52799 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.4■□□□□ 0.22
EFNB2P52799 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
EFNB2P52799 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
EFNB2P52799 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.4■□□□□ 0.22
EFNB2P52799 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
EFNB2P52799 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
EFNB2P52799 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
EFNB2P52799 LSM12P1-201ENST00000411836 588 ntBASIC16.4■□□□□ 0.22
EFNB2P52799 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
EFNB2P52799 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC16.4■□□□□ 0.22
EFNB2P52799 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.4■□□□□ 0.22
EFNB2P52799 AC091874.3-201ENST00000512672 1195 ntBASIC16.4■□□□□ 0.22
EFNB2P52799 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.4■□□□□ 0.22
EFNB2P52799 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.4■□□□□ 0.22
EFNB2P52799 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
EFNB2P52799 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
EFNB2P52799 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
EFNB2P52799 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.4■□□□□ 0.22
EFNB2P52799 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.4■□□□□ 0.22
EFNB2P52799 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.4■□□□□ 0.22
EFNB2P52799 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.4■□□□□ 0.22
EFNB2P52799 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
EFNB2P52799 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
EFNB2P52799 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
EFNB2P52799 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
EFNB2P52799 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
EFNB2P52799 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.4■□□□□ 0.22
EFNB2P52799 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
EFNB2P52799 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.4■□□□□ 0.22
EFNB2P52799 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
EFNB2P52799 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms