Protein–RNA interactions for Protein: P46020

PHKA1, Phosphorylase b kinase regulatory subunit alpha, skeletal muscle isoform, humanhuman

Predictions only

Length 1,223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHKA1P46020 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC23.04■■□□□ 1.28
PHKA1P46020 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC23.04■■□□□ 1.28
PHKA1P46020 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PHKA1P46020 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC23.04■■□□□ 1.28
PHKA1P46020 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC23.04■■□□□ 1.28
PHKA1P46020 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC23.04■■□□□ 1.28
PHKA1P46020 AC140113.3-201ENST00000605663 199 ntBASIC23.04■■□□□ 1.28
PHKA1P46020 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC23.04■■□□□ 1.28
PHKA1P46020 AC036111.1-201ENST00000533973 1582 ntBASIC23.04■■□□□ 1.28
PHKA1P46020 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC23.03■■□□□ 1.28
PHKA1P46020 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PHKA1P46020 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC23.03■■□□□ 1.28
PHKA1P46020 FEM1AP3-201ENST00000403722 1741 ntBASIC23.03■■□□□ 1.28
PHKA1P46020 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC23.03■■□□□ 1.28
PHKA1P46020 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PHKA1P46020 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PHKA1P46020 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
PHKA1P46020 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PHKA1P46020 AL359075.1-203ENST00000462729 1002 ntBASIC23.03■■□□□ 1.28
PHKA1P46020 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC23.03■■□□□ 1.28
PHKA1P46020 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC23.03■■□□□ 1.28
PHKA1P46020 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
PHKA1P46020 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
PHKA1P46020 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PHKA1P46020 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PHKA1P46020 UBQLN4P1-201ENST00000461599 1801 ntBASIC23.03■■□□□ 1.28
PHKA1P46020 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
PHKA1P46020 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC23.02■■□□□ 1.28
PHKA1P46020 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PHKA1P46020 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC23.02■■□□□ 1.28
PHKA1P46020 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PHKA1P46020 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
PHKA1P46020 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PHKA1P46020 AL031133.1-201ENST00000406807 723 ntBASIC23.02■■□□□ 1.28
PHKA1P46020 AC092647.4-201ENST00000457211 535 ntBASIC23.02■■□□□ 1.28
PHKA1P46020 GCSHP2-201ENST00000560971 527 ntBASIC23.02■■□□□ 1.28
PHKA1P46020 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC23.02■■□□□ 1.28
PHKA1P46020 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PHKA1P46020 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC23.02■■□□□ 1.28
PHKA1P46020 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC23.02■■□□□ 1.28
PHKA1P46020 AL031432.5-201ENST00000641059 760 ntBASIC23.02■■□□□ 1.28
PHKA1P46020 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC23.02■■□□□ 1.28
PHKA1P46020 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC23.02■■□□□ 1.28
PHKA1P46020 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
PHKA1P46020 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC23.02■■□□□ 1.27
PHKA1P46020 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC23.01■■□□□ 1.27
PHKA1P46020 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC23.01■■□□□ 1.27
PHKA1P46020 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC23.01■■□□□ 1.27
PHKA1P46020 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC23.01■■□□□ 1.27
PHKA1P46020 COPE-203ENST00000351079 907 ntTSL 2 BASIC23.01■■□□□ 1.27
PHKA1P46020 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
PHKA1P46020 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PHKA1P46020 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC23.01■■□□□ 1.27
PHKA1P46020 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC23.01■■□□□ 1.27
PHKA1P46020 NEK4P2-201ENST00000580004 1012 ntBASIC23.01■■□□□ 1.27
PHKA1P46020 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC23.01■■□□□ 1.27
PHKA1P46020 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC23.01■■□□□ 1.27
PHKA1P46020 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC23.01■■□□□ 1.27
PHKA1P46020 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PHKA1P46020 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PHKA1P46020 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC23.01■■□□□ 1.27
PHKA1P46020 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
PHKA1P46020 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PHKA1P46020 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PHKA1P46020 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC23■■□□□ 1.27
PHKA1P46020 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC23■■□□□ 1.27
PHKA1P46020 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PHKA1P46020 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC23■■□□□ 1.27
PHKA1P46020 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC23■■□□□ 1.27
PHKA1P46020 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC23■■□□□ 1.27
PHKA1P46020 ISCU-203ENST00000431221 799 ntTSL 2 BASIC23■■□□□ 1.27
PHKA1P46020 LINC01238-205ENST00000567549 1107 ntBASIC23■■□□□ 1.27
PHKA1P46020 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
PHKA1P46020 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC23■■□□□ 1.27
PHKA1P46020 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC23■■□□□ 1.27
PHKA1P46020 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC23■■□□□ 1.27
PHKA1P46020 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC23■■□□□ 1.27
PHKA1P46020 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC23■■□□□ 1.27
PHKA1P46020 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PHKA1P46020 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PHKA1P46020 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
PHKA1P46020 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC23■■□□□ 1.27
PHKA1P46020 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC23■■□□□ 1.27
PHKA1P46020 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PHKA1P46020 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC23■■□□□ 1.27
PHKA1P46020 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC23■■□□□ 1.27
PHKA1P46020 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PHKA1P46020 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PHKA1P46020 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC22.99■■□□□ 1.27
PHKA1P46020 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PHKA1P46020 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
PHKA1P46020 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
PHKA1P46020 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PHKA1P46020 MED25-212ENST00000618715 1467 ntTSL 5 BASIC22.99■■□□□ 1.27
PHKA1P46020 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PHKA1P46020 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
PHKA1P46020 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PHKA1P46020 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC22.99■■□□□ 1.27
PHKA1P46020 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
PHKA1P46020 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms