Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SSR1P43307 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.19■□□□□ 0.82
SSR1P43307 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
SSR1P43307 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.19■□□□□ 0.82
SSR1P43307 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.19■□□□□ 0.82
SSR1P43307 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.19■□□□□ 0.82
SSR1P43307 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.19■□□□□ 0.82
SSR1P43307 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.19■□□□□ 0.82
SSR1P43307 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.19■□□□□ 0.82
SSR1P43307 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.19■□□□□ 0.82
SSR1P43307 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SSR1P43307 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SSR1P43307 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SSR1P43307 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SSR1P43307 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.19■□□□□ 0.82
SSR1P43307 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
SSR1P43307 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
SSR1P43307 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.19■□□□□ 0.82
SSR1P43307 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SSR1P43307 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SSR1P43307 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SSR1P43307 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SSR1P43307 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SSR1P43307 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SSR1P43307 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SSR1P43307 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SSR1P43307 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SSR1P43307 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.18■□□□□ 0.82
SSR1P43307 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SSR1P43307 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.18■□□□□ 0.82
SSR1P43307 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.18■□□□□ 0.82
SSR1P43307 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SSR1P43307 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
SSR1P43307 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SSR1P43307 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.18■□□□□ 0.82
SSR1P43307 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SSR1P43307 AC026366.1-201ENST00000488803 879 ntBASIC20.18■□□□□ 0.82
SSR1P43307 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.18■□□□□ 0.82
SSR1P43307 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.18■□□□□ 0.82
SSR1P43307 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SSR1P43307 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.18■□□□□ 0.82
SSR1P43307 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.18■□□□□ 0.82
SSR1P43307 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SSR1P43307 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SSR1P43307 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SSR1P43307 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
SSR1P43307 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SSR1P43307 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SSR1P43307 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SSR1P43307 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SSR1P43307 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
SSR1P43307 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
SSR1P43307 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SSR1P43307 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SSR1P43307 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SSR1P43307 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SSR1P43307 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SSR1P43307 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SSR1P43307 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SSR1P43307 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SSR1P43307 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SSR1P43307 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SSR1P43307 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.17■□□□□ 0.82
SSR1P43307 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SSR1P43307 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.17■□□□□ 0.82
SSR1P43307 KRT18P6-201ENST00000555540 1265 ntBASIC20.17■□□□□ 0.82
SSR1P43307 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.17■□□□□ 0.82
SSR1P43307 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SSR1P43307 AC233263.1-201ENST00000578059 224 ntBASIC20.17■□□□□ 0.82
SSR1P43307 AC004264.1-201ENST00000608354 794 ntBASIC20.17■□□□□ 0.82
SSR1P43307 AC069544.1-201ENST00000609399 999 ntBASIC20.17■□□□□ 0.82
SSR1P43307 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.17■□□□□ 0.82
SSR1P43307 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.17■□□□□ 0.82
SSR1P43307 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SSR1P43307 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SSR1P43307 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SSR1P43307 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
SSR1P43307 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SSR1P43307 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SSR1P43307 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.17■□□□□ 0.82
SSR1P43307 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.16■□□□□ 0.82
SSR1P43307 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSR1P43307 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SSR1P43307 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSR1P43307 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSR1P43307 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SSR1P43307 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.16■□□□□ 0.82
SSR1P43307 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSR1P43307 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSR1P43307 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSR1P43307 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSR1P43307 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.16■□□□□ 0.82
SSR1P43307 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.16■□□□□ 0.82
SSR1P43307 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.16■□□□□ 0.82
SSR1P43307 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSR1P43307 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.16■□□□□ 0.82
SSR1P43307 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.16■□□□□ 0.82
SSR1P43307 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSR1P43307 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SSR1P43307 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms