Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 AL162377.1-201ENST00000618844 1793 ntBASIC18.78■□□□□ 0.6
HOXA6P31267 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HOXA6P31267 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOXA6P31267 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HOXA6P31267 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOXA6P31267 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.77■□□□□ 0.6
HOXA6P31267 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.77■□□□□ 0.6
HOXA6P31267 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.77■□□□□ 0.6
HOXA6P31267 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HOXA6P31267 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOXA6P31267 MRPL3P1-201ENST00000400109 1033 ntBASIC18.77■□□□□ 0.6
HOXA6P31267 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.77■□□□□ 0.6
HOXA6P31267 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOXA6P31267 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.77■□□□□ 0.6
HOXA6P31267 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.77■□□□□ 0.6
HOXA6P31267 Z69720.1-201ENST00000601483 472 ntBASIC18.77■□□□□ 0.6
HOXA6P31267 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
HOXA6P31267 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.77■□□□□ 0.6
HOXA6P31267 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
HOXA6P31267 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HOXA6P31267 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.77■□□□□ 0.59
HOXA6P31267 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
HOXA6P31267 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HOXA6P31267 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.76■□□□□ 0.59
HOXA6P31267 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.76■□□□□ 0.59
HOXA6P31267 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HOXA6P31267 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HOXA6P31267 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HOXA6P31267 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
HOXA6P31267 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HOXA6P31267 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HOXA6P31267 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HOXA6P31267 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HOXA6P31267 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.76■□□□□ 0.59
HOXA6P31267 AP003733.1-201ENST00000491725 852 ntBASIC18.76■□□□□ 0.59
HOXA6P31267 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.76■□□□□ 0.59
HOXA6P31267 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.76■□□□□ 0.59
HOXA6P31267 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.76■□□□□ 0.59
HOXA6P31267 MIR3180-4-201ENST00000582223 153 ntBASIC18.76■□□□□ 0.59
HOXA6P31267 AC064862.7-201ENST00000604520 867 ntBASIC18.76■□□□□ 0.59
HOXA6P31267 AC010240.3-201ENST00000607688 395 ntBASIC18.76■□□□□ 0.59
HOXA6P31267 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HOXA6P31267 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.76■□□□□ 0.59
HOXA6P31267 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HOXA6P31267 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HOXA6P31267 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
HOXA6P31267 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
HOXA6P31267 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.75■□□□□ 0.59
HOXA6P31267 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
HOXA6P31267 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
HOXA6P31267 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.75■□□□□ 0.59
HOXA6P31267 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.75■□□□□ 0.59
HOXA6P31267 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
HOXA6P31267 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HOXA6P31267 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HOXA6P31267 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HOXA6P31267 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HOXA6P31267 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.75■□□□□ 0.59
HOXA6P31267 IGHV3-47-201ENST00000425060 335 ntBASIC18.75■□□□□ 0.59
HOXA6P31267 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.75■□□□□ 0.59
HOXA6P31267 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
HOXA6P31267 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HOXA6P31267 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.75■□□□□ 0.59
HOXA6P31267 AC074051.2-201ENST00000565115 352 ntBASIC18.75■□□□□ 0.59
HOXA6P31267 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.75■□□□□ 0.59
HOXA6P31267 IGHV3-41-201ENST00000613121 348 ntBASIC18.75■□□□□ 0.59
HOXA6P31267 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HOXA6P31267 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HOXA6P31267 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HOXA6P31267 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HOXA6P31267 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HOXA6P31267 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.75■□□□□ 0.59
HOXA6P31267 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HOXA6P31267 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
HOXA6P31267 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
HOXA6P31267 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HOXA6P31267 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.75■□□□□ 0.59
HOXA6P31267 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.74■□□□□ 0.59
HOXA6P31267 SDHAP1-207ENST00000440850 2000 ntBASIC18.74■□□□□ 0.59
HOXA6P31267 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HOXA6P31267 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HOXA6P31267 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HOXA6P31267 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
HOXA6P31267 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
HOXA6P31267 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HOXA6P31267 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HOXA6P31267 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HOXA6P31267 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HOXA6P31267 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.74■□□□□ 0.59
HOXA6P31267 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.74■□□□□ 0.59
HOXA6P31267 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.74■□□□□ 0.59
HOXA6P31267 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HOXA6P31267 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
HOXA6P31267 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HOXA6P31267 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.74■□□□□ 0.59
HOXA6P31267 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HOXA6P31267 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HOXA6P31267 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HOXA6P31267 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
HOXA6P31267 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms