Protein–RNA interactions for Protein: P27695

APEX1, DNA-(apurinic or apyrimidinic site) lyase, humanhuman

Known RBP Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1P27695 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.15■□□□□ 0.34
APEX1P27695 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
APEX1P27695 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
APEX1P27695 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
APEX1P27695 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.15■□□□□ 0.34
APEX1P27695 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.15■□□□□ 0.34
APEX1P27695 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.15■□□□□ 0.34
APEX1P27695 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
APEX1P27695 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.15■□□□□ 0.34
APEX1P27695 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
APEX1P27695 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
APEX1P27695 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
APEX1P27695 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
APEX1P27695 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.14■□□□□ 0.34
APEX1P27695 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.14■□□□□ 0.34
APEX1P27695 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
APEX1P27695 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
APEX1P27695 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.14■□□□□ 0.33
APEX1P27695 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.14■□□□□ 0.33
APEX1P27695 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
APEX1P27695 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
APEX1P27695 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
APEX1P27695 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
APEX1P27695 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
APEX1P27695 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
APEX1P27695 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.14■□□□□ 0.33
APEX1P27695 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
APEX1P27695 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
APEX1P27695 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
APEX1P27695 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
APEX1P27695 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
APEX1P27695 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
APEX1P27695 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.14■□□□□ 0.33
APEX1P27695 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
APEX1P27695 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.14■□□□□ 0.33
APEX1P27695 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
APEX1P27695 AC233263.1-201ENST00000578059 224 ntBASIC17.14■□□□□ 0.33
APEX1P27695 AC069544.1-201ENST00000609399 999 ntBASIC17.14■□□□□ 0.33
APEX1P27695 AL121829.2-201ENST00000620908 328 ntBASIC17.14■□□□□ 0.33
APEX1P27695 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
APEX1P27695 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
APEX1P27695 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.14■□□□□ 0.33
APEX1P27695 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
APEX1P27695 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
APEX1P27695 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
APEX1P27695 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
APEX1P27695 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
APEX1P27695 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
APEX1P27695 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
APEX1P27695 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.14■□□□□ 0.33
APEX1P27695 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
APEX1P27695 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
APEX1P27695 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
APEX1P27695 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
APEX1P27695 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
APEX1P27695 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.13■□□□□ 0.33
APEX1P27695 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.13■□□□□ 0.33
APEX1P27695 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
APEX1P27695 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.13■□□□□ 0.33
APEX1P27695 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
APEX1P27695 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.13■□□□□ 0.33
APEX1P27695 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
APEX1P27695 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.13■□□□□ 0.33
APEX1P27695 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.13■□□□□ 0.33
APEX1P27695 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.13■□□□□ 0.33
APEX1P27695 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
APEX1P27695 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.13■□□□□ 0.33
APEX1P27695 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.13■□□□□ 0.33
APEX1P27695 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
APEX1P27695 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
APEX1P27695 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
APEX1P27695 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.13■□□□□ 0.33
APEX1P27695 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
APEX1P27695 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
APEX1P27695 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
APEX1P27695 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
APEX1P27695 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
APEX1P27695 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
APEX1P27695 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
APEX1P27695 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
APEX1P27695 AC090164.3-201ENST00000610780 2143 ntBASIC17.12■□□□□ 0.33
APEX1P27695 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
APEX1P27695 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
APEX1P27695 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.12■□□□□ 0.33
APEX1P27695 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
APEX1P27695 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
APEX1P27695 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
APEX1P27695 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
APEX1P27695 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
APEX1P27695 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
APEX1P27695 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
APEX1P27695 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.12■□□□□ 0.33
APEX1P27695 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.12■□□□□ 0.33
APEX1P27695 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
APEX1P27695 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
APEX1P27695 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.12■□□□□ 0.33
APEX1P27695 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
APEX1P27695 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.12■□□□□ 0.33
APEX1P27695 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
APEX1P27695 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms