Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VARSP26640 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VARSP26640 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VARSP26640 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
VARSP26640 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VARSP26640 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VARSP26640 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.67■□□□□ 0.58
VARSP26640 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VARSP26640 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.66■□□□□ 0.58
VARSP26640 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VARSP26640 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VARSP26640 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VARSP26640 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VARSP26640 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
VARSP26640 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
VARSP26640 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.66■□□□□ 0.58
VARSP26640 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.66■□□□□ 0.58
VARSP26640 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.66■□□□□ 0.58
VARSP26640 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.66■□□□□ 0.58
VARSP26640 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
VARSP26640 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
VARSP26640 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.66■□□□□ 0.58
VARSP26640 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
VARSP26640 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
VARSP26640 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.66■□□□□ 0.58
VARSP26640 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.66■□□□□ 0.58
VARSP26640 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VARSP26640 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VARSP26640 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
VARSP26640 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VARSP26640 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
VARSP26640 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
VARSP26640 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.65■□□□□ 0.58
VARSP26640 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VARSP26640 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
VARSP26640 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.65■□□□□ 0.58
VARSP26640 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.65■□□□□ 0.58
VARSP26640 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.65■□□□□ 0.58
VARSP26640 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
VARSP26640 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
VARSP26640 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VARSP26640 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VARSP26640 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VARSP26640 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
VARSP26640 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.65■□□□□ 0.58
VARSP26640 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
VARSP26640 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.65■□□□□ 0.58
VARSP26640 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.65■□□□□ 0.58
VARSP26640 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VARSP26640 C1QL1P1-201ENST00000568105 661 ntBASIC18.65■□□□□ 0.58
VARSP26640 AC110285.5-201ENST00000611501 352 ntBASIC18.65■□□□□ 0.58
VARSP26640 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
VARSP26640 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.65■□□□□ 0.58
VARSP26640 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.65■□□□□ 0.58
VARSP26640 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
VARSP26640 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VARSP26640 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VARSP26640 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VARSP26640 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
VARSP26640 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
VARSP26640 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.64■□□□□ 0.58
VARSP26640 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.64■□□□□ 0.58
VARSP26640 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
VARSP26640 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
VARSP26640 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VARSP26640 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
VARSP26640 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VARSP26640 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.64■□□□□ 0.57
VARSP26640 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VARSP26640 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VARSP26640 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.64■□□□□ 0.57
VARSP26640 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.64■□□□□ 0.57
VARSP26640 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.64■□□□□ 0.57
VARSP26640 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.64■□□□□ 0.57
VARSP26640 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.64■□□□□ 0.57
VARSP26640 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VARSP26640 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
VARSP26640 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VARSP26640 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.64■□□□□ 0.57
VARSP26640 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.64■□□□□ 0.57
VARSP26640 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.64■□□□□ 0.57
VARSP26640 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VARSP26640 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
VARSP26640 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
VARSP26640 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VARSP26640 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
VARSP26640 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.64■□□□□ 0.57
VARSP26640 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.64■□□□□ 0.57
VARSP26640 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
VARSP26640 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
VARSP26640 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.63■□□□□ 0.57
VARSP26640 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
VARSP26640 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VARSP26640 AC007613.1-201ENST00000572811 2597 ntBASIC18.63■□□□□ 0.57
VARSP26640 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.63■□□□□ 0.57
VARSP26640 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
VARSP26640 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
VARSP26640 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
VARSP26640 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VARSP26640 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms