Protein–RNA interactions for Protein: P23634

ATP2B4, Plasma membrane calcium-transporting ATPase 4, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4P23634 TP73-202ENST00000354437 2140 ntTSL 5 BASIC23.05■■□□□ 1.28
ATP2B4P23634 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
ATP2B4P23634 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
ATP2B4P23634 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ATP2B4P23634 Z82202.1-201ENST00000623446 1880 ntBASIC23.05■■□□□ 1.28
ATP2B4P23634 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
ATP2B4P23634 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
ATP2B4P23634 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
ATP2B4P23634 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
ATP2B4P23634 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
ATP2B4P23634 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ATP2B4P23634 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ATP2B4P23634 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC23.04■■□□□ 1.28
ATP2B4P23634 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC23.04■■□□□ 1.28
ATP2B4P23634 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC23.04■■□□□ 1.28
ATP2B4P23634 MIR3917-201ENST00000580971 93 ntBASIC23.04■■□□□ 1.28
ATP2B4P23634 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
ATP2B4P23634 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ATP2B4P23634 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
ATP2B4P23634 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC23.04■■□□□ 1.28
ATP2B4P23634 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
ATP2B4P23634 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
ATP2B4P23634 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ATP2B4P23634 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
ATP2B4P23634 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
ATP2B4P23634 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
ATP2B4P23634 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
ATP2B4P23634 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ATP2B4P23634 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
ATP2B4P23634 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
ATP2B4P23634 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC23.03■■□□□ 1.28
ATP2B4P23634 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
ATP2B4P23634 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC23.03■■□□□ 1.28
ATP2B4P23634 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC23.03■■□□□ 1.28
ATP2B4P23634 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC23.03■■□□□ 1.28
ATP2B4P23634 MIR3652-201ENST00000579335 131 ntBASIC23.03■■□□□ 1.28
ATP2B4P23634 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
ATP2B4P23634 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
ATP2B4P23634 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC23.03■■□□□ 1.28
ATP2B4P23634 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC23.03■■□□□ 1.28
ATP2B4P23634 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
ATP2B4P23634 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ATP2B4P23634 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC23.03■■□□□ 1.28
ATP2B4P23634 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
ATP2B4P23634 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
ATP2B4P23634 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ATP2B4P23634 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC23.02■■□□□ 1.28
ATP2B4P23634 AL162741.1-201ENST00000565563 1558 ntBASIC23.02■■□□□ 1.28
ATP2B4P23634 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ATP2B4P23634 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC23.02■■□□□ 1.28
ATP2B4P23634 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ATP2B4P23634 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC23.02■■□□□ 1.28
ATP2B4P23634 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC23.02■■□□□ 1.28
ATP2B4P23634 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC23.02■■□□□ 1.28
ATP2B4P23634 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC23.02■■□□□ 1.28
ATP2B4P23634 MIR3180-1-201ENST00000580374 94 ntBASIC23.02■■□□□ 1.28
ATP2B4P23634 MIR3180-3-201ENST00000584616 94 ntBASIC23.02■■□□□ 1.28
ATP2B4P23634 AL136038.4-201ENST00000603606 1261 ntBASIC23.02■■□□□ 1.28
ATP2B4P23634 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ATP2B4P23634 SPEG-225ENST00000617028 815 ntTSL 5 BASIC23.02■■□□□ 1.28
ATP2B4P23634 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
ATP2B4P23634 VPS72-207ENST00000640458 689 ntTSL 5 BASIC23.02■■□□□ 1.28
ATP2B4P23634 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
ATP2B4P23634 AL109659.2-201ENST00000606809 1674 ntBASIC23.02■■□□□ 1.28
ATP2B4P23634 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
ATP2B4P23634 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
ATP2B4P23634 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
ATP2B4P23634 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ATP2B4P23634 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC23.01■■□□□ 1.27
ATP2B4P23634 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
ATP2B4P23634 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ATP2B4P23634 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
ATP2B4P23634 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
ATP2B4P23634 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ATP2B4P23634 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC23.01■■□□□ 1.27
ATP2B4P23634 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ATP2B4P23634 AP002383.4-201ENST00000442518 975 ntBASIC23.01■■□□□ 1.27
ATP2B4P23634 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC23.01■■□□□ 1.27
ATP2B4P23634 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ATP2B4P23634 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC23.01■■□□□ 1.27
ATP2B4P23634 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC23.01■■□□□ 1.27
ATP2B4P23634 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC23.01■■□□□ 1.27
ATP2B4P23634 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC23.01■■□□□ 1.27
ATP2B4P23634 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC23.01■■□□□ 1.27
ATP2B4P23634 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC23.01■■□□□ 1.27
ATP2B4P23634 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ATP2B4P23634 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ATP2B4P23634 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ATP2B4P23634 AL391807.1-203ENST00000604392 2365 ntBASIC23.01■■□□□ 1.27
ATP2B4P23634 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ATP2B4P23634 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ATP2B4P23634 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ATP2B4P23634 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC23.01■■□□□ 1.27
ATP2B4P23634 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC23.01■■□□□ 1.27
ATP2B4P23634 AC093525.10-201ENST00000625130 1569 ntBASIC23.01■■□□□ 1.27
ATP2B4P23634 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC23■■□□□ 1.27
ATP2B4P23634 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC23■■□□□ 1.27
ATP2B4P23634 TEX21P-204ENST00000641479 1693 ntBASIC23■■□□□ 1.27
ATP2B4P23634 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ATP2B4P23634 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms