Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.69■□□□□ 0.9
RFX1P22670 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
RFX1P22670 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFX1P22670 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
RFX1P22670 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFX1P22670 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
RFX1P22670 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
RFX1P22670 IRX1P1-201ENST00000438849 1838 ntBASIC20.69■□□□□ 0.9
RFX1P22670 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.69■□□□□ 0.9
RFX1P22670 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.69■□□□□ 0.9
RFX1P22670 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFX1P22670 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFX1P22670 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFX1P22670 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFX1P22670 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RFX1P22670 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFX1P22670 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
RFX1P22670 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.68■□□□□ 0.9
RFX1P22670 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
RFX1P22670 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
RFX1P22670 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.68■□□□□ 0.9
RFX1P22670 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.68■□□□□ 0.9
RFX1P22670 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RFX1P22670 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.68■□□□□ 0.9
RFX1P22670 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
RFX1P22670 HLA-A-209ENST00000638375 975 ntBASIC20.68■□□□□ 0.9
RFX1P22670 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.68■□□□□ 0.9
RFX1P22670 KRT18P22-201ENST00000402024 1347 ntBASIC20.68■□□□□ 0.9
RFX1P22670 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFX1P22670 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RFX1P22670 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFX1P22670 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFX1P22670 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFX1P22670 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.68■□□□□ 0.9
RFX1P22670 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFX1P22670 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.67■□□□□ 0.9
RFX1P22670 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFX1P22670 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFX1P22670 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFX1P22670 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFX1P22670 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.67■□□□□ 0.9
RFX1P22670 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.67■□□□□ 0.9
RFX1P22670 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFX1P22670 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RFX1P22670 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.67■□□□□ 0.9
RFX1P22670 AL160286.2-201ENST00000567150 934 ntBASIC20.67■□□□□ 0.9
RFX1P22670 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.67■□□□□ 0.9
RFX1P22670 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFX1P22670 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.67■□□□□ 0.9
RFX1P22670 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RFX1P22670 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFX1P22670 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFX1P22670 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.67■□□□□ 0.9
RFX1P22670 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFX1P22670 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RFX1P22670 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFX1P22670 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
RFX1P22670 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFX1P22670 FEM1AP3-201ENST00000403722 1741 ntBASIC20.67■□□□□ 0.9
RFX1P22670 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.67■□□□□ 0.9
RFX1P22670 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
RFX1P22670 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFX1P22670 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.66■□□□□ 0.9
RFX1P22670 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RFX1P22670 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFX1P22670 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFX1P22670 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.66■□□□□ 0.9
RFX1P22670 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.66■□□□□ 0.9
RFX1P22670 NUDT16P1-203ENST00000513809 620 ntBASIC20.66■□□□□ 0.9
RFX1P22670 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.66■□□□□ 0.9
RFX1P22670 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.66■□□□□ 0.9
RFX1P22670 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
RFX1P22670 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
RFX1P22670 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.66■□□□□ 0.9
RFX1P22670 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
RFX1P22670 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFX1P22670 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.66■□□□□ 0.9
RFX1P22670 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFX1P22670 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
RFX1P22670 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFX1P22670 AL049812.1-201ENST00000432563 2267 ntBASIC20.65■□□□□ 0.9
RFX1P22670 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RFX1P22670 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.65■□□□□ 0.9
RFX1P22670 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFX1P22670 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
RFX1P22670 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFX1P22670 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFX1P22670 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RFX1P22670 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.65■□□□□ 0.9
RFX1P22670 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.65■□□□□ 0.9
RFX1P22670 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
RFX1P22670 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RFX1P22670 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.65■□□□□ 0.9
RFX1P22670 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.65■□□□□ 0.9
RFX1P22670 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFX1P22670 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
RFX1P22670 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFX1P22670 AC093503.3-201ENST00000624917 2352 ntBASIC20.65■□□□□ 0.9
RFX1P22670 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RFX1P22670 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms