Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
NCLP19338 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC22.55■■□□□ 1.2
NCLP19338 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC22.55■■□□□ 1.2
NCLP19338 BET1L-207ENST00000529614 560 ntTSL 5 BASIC22.55■■□□□ 1.2
NCLP19338 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
NCLP19338 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NCLP19338 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC22.55■■□□□ 1.2
NCLP19338 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC22.55■■□□□ 1.2
NCLP19338 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC22.55■■□□□ 1.2
NCLP19338 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
NCLP19338 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
NCLP19338 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
NCLP19338 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NCLP19338 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NCLP19338 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NCLP19338 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC22.55■■□□□ 1.2
NCLP19338 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
NCLP19338 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
NCLP19338 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
NCLP19338 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
NCLP19338 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
NCLP19338 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
NCLP19338 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NCLP19338 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC22.54■■□□□ 1.2
NCLP19338 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
NCLP19338 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC22.54■■□□□ 1.2
NCLP19338 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC22.54■■□□□ 1.2
NCLP19338 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
NCLP19338 DUSP5P2-201ENST00000426873 1033 ntBASIC22.54■■□□□ 1.2
NCLP19338 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC22.54■■□□□ 1.2
NCLP19338 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NCLP19338 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC22.54■■□□□ 1.2
NCLP19338 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC22.54■■□□□ 1.2
NCLP19338 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
NCLP19338 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC22.54■■□□□ 1.2
NCLP19338 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC22.54■■□□□ 1.2
NCLP19338 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
NCLP19338 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC22.54■■□□□ 1.2
NCLP19338 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
NCLP19338 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC22.54■■□□□ 1.2
NCLP19338 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NCLP19338 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
NCLP19338 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NCLP19338 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
NCLP19338 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC22.54■■□□□ 1.2
NCLP19338 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
NCLP19338 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
NCLP19338 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC22.53■■□□□ 1.2
NCLP19338 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC22.53■■□□□ 1.2
NCLP19338 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NCLP19338 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NCLP19338 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
NCLP19338 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
NCLP19338 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC22.53■■□□□ 1.2
NCLP19338 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
NCLP19338 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
NCLP19338 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC22.53■■□□□ 1.2
NCLP19338 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC22.53■■□□□ 1.2
NCLP19338 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC22.53■■□□□ 1.2
NCLP19338 RNA5SP413-201ENST00000516373 109 ntBASIC22.53■■□□□ 1.2
NCLP19338 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
NCLP19338 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC22.53■■□□□ 1.2
NCLP19338 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC22.53■■□□□ 1.2
NCLP19338 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC22.53■■□□□ 1.2
NCLP19338 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC22.53■■□□□ 1.2
NCLP19338 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
NCLP19338 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
NCLP19338 NXN-202ENST00000537628 1340 ntTSL 3 BASIC22.53■■□□□ 1.2
NCLP19338 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC22.53■■□□□ 1.2
NCLP19338 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NCLP19338 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
NCLP19338 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NCLP19338 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC22.53■■□□□ 1.2
NCLP19338 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC22.52■■□□□ 1.2
NCLP19338 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NCLP19338 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
NCLP19338 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NCLP19338 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
NCLP19338 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC22.52■■□□□ 1.2
NCLP19338 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC22.52■■□□□ 1.2
NCLP19338 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
NCLP19338 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
NCLP19338 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
NCLP19338 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
NCLP19338 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
NCLP19338 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
NCLP19338 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
NCLP19338 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
NCLP19338 LSM12P1-201ENST00000411836 588 ntBASIC22.52■■□□□ 1.2
NCLP19338 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
NCLP19338 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC22.52■■□□□ 1.2
NCLP19338 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
NCLP19338 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC22.52■■□□□ 1.2
NCLP19338 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
NCLP19338 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
NCLP19338 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NCLP19338 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NCLP19338 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC22.52■■□□□ 1.2
NCLP19338 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
NCLP19338 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms