Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATF1P18846 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATF1P18846 AC067852.2-201ENST00000590513 2313 ntBASIC16.69■□□□□ 0.26
ATF1P18846 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
ATF1P18846 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATF1P18846 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
ATF1P18846 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATF1P18846 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATF1P18846 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATF1P18846 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATF1P18846 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATF1P18846 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC16.69■□□□□ 0.26
ATF1P18846 PPP1R14BP3-201ENST00000509033 445 ntBASIC16.69■□□□□ 0.26
ATF1P18846 MAX-217ENST00000557277 728 ntTSL 3 BASIC16.69■□□□□ 0.26
ATF1P18846 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.69■□□□□ 0.26
ATF1P18846 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATF1P18846 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATF1P18846 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.69■□□□□ 0.26
ATF1P18846 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATF1P18846 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATF1P18846 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATF1P18846 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
ATF1P18846 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
ATF1P18846 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATF1P18846 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
ATF1P18846 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
ATF1P18846 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
ATF1P18846 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATF1P18846 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATF1P18846 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.68■□□□□ 0.26
ATF1P18846 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.68■□□□□ 0.26
ATF1P18846 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATF1P18846 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.68■□□□□ 0.26
ATF1P18846 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATF1P18846 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATF1P18846 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ATF1P18846 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATF1P18846 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATF1P18846 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
ATF1P18846 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC16.68■□□□□ 0.26
ATF1P18846 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC16.68■□□□□ 0.26
ATF1P18846 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.68■□□□□ 0.26
ATF1P18846 GATS-209ENST00000454084 1030 ntTSL 3 BASIC16.68■□□□□ 0.26
ATF1P18846 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.68■□□□□ 0.26
ATF1P18846 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.68■□□□□ 0.26
ATF1P18846 MIR4758-201ENST00000577688 71 ntBASIC16.68■□□□□ 0.26
ATF1P18846 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC16.68■□□□□ 0.26
ATF1P18846 WT1-AS_3.1-201ENST00000613262 234 ntBASIC16.68■□□□□ 0.26
ATF1P18846 AL121906.2-201ENST00000621597 723 ntBASIC16.68■□□□□ 0.26
ATF1P18846 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.68■□□□□ 0.26
ATF1P18846 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ATF1P18846 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATF1P18846 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.68■□□□□ 0.26
ATF1P18846 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATF1P18846 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
ATF1P18846 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATF1P18846 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATF1P18846 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATF1P18846 AC092368.3-202ENST00000574180 1591 ntBASIC16.68■□□□□ 0.26
ATF1P18846 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.68■□□□□ 0.26
ATF1P18846 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
ATF1P18846 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ATF1P18846 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ATF1P18846 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATF1P18846 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
ATF1P18846 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
ATF1P18846 ANO7L1-203ENST00000602586 1720 ntBASIC16.67■□□□□ 0.26
ATF1P18846 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.67■□□□□ 0.26
ATF1P18846 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ATF1P18846 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.67■□□□□ 0.26
ATF1P18846 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
ATF1P18846 AC104417.2-201ENST00000562989 1793 ntBASIC16.67■□□□□ 0.26
ATF1P18846 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
ATF1P18846 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATF1P18846 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATF1P18846 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
ATF1P18846 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATF1P18846 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.67■□□□□ 0.26
ATF1P18846 GUSBP6-202ENST00000438529 1198 ntBASIC16.67■□□□□ 0.26
ATF1P18846 TSPY6P-201ENST00000448518 926 ntBASIC16.67■□□□□ 0.26
ATF1P18846 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC16.67■□□□□ 0.26
ATF1P18846 AC097658.1-201ENST00000475555 843 ntBASIC16.67■□□□□ 0.26
ATF1P18846 REXO2-208ENST00000539754 791 ntTSL 2 BASIC16.67■□□□□ 0.26
ATF1P18846 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.67■□□□□ 0.26
ATF1P18846 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
ATF1P18846 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.67■□□□□ 0.26
ATF1P18846 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ATF1P18846 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.67■□□□□ 0.26
ATF1P18846 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
ATF1P18846 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATF1P18846 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
ATF1P18846 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATF1P18846 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATF1P18846 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
ATF1P18846 ABALON-201ENST00000629058 1903 ntBASIC16.66■□□□□ 0.26
ATF1P18846 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATF1P18846 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATF1P18846 AP006587.1-201ENST00000534129 1502 ntBASIC16.66■□□□□ 0.26
ATF1P18846 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATF1P18846 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms