Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDGFRAP16234 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PDGFRAP16234 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PDGFRAP16234 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
PDGFRAP16234 FSCN1P1-201ENST00000568912 1481 ntBASIC19.95■□□□□ 0.78
PDGFRAP16234 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PDGFRAP16234 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
PDGFRAP16234 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.95■□□□□ 0.78
PDGFRAP16234 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDGFRAP16234 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.95■□□□□ 0.78
PDGFRAP16234 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.95■□□□□ 0.78
PDGFRAP16234 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.95■□□□□ 0.78
PDGFRAP16234 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.95■□□□□ 0.78
PDGFRAP16234 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.95■□□□□ 0.78
PDGFRAP16234 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PDGFRAP16234 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDGFRAP16234 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDGFRAP16234 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDGFRAP16234 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
PDGFRAP16234 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
PDGFRAP16234 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDGFRAP16234 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.94■□□□□ 0.78
PDGFRAP16234 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
PDGFRAP16234 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PDGFRAP16234 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDGFRAP16234 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
PDGFRAP16234 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDGFRAP16234 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.94■□□□□ 0.78
PDGFRAP16234 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDGFRAP16234 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.94■□□□□ 0.78
PDGFRAP16234 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDGFRAP16234 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDGFRAP16234 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDGFRAP16234 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
PDGFRAP16234 MESTP1-201ENST00000404287 994 ntBASIC19.94■□□□□ 0.78
PDGFRAP16234 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.94■□□□□ 0.78
PDGFRAP16234 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PDGFRAP16234 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
PDGFRAP16234 NUDT16P1-203ENST00000513809 620 ntBASIC19.94■□□□□ 0.78
PDGFRAP16234 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.94■□□□□ 0.78
PDGFRAP16234 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PDGFRAP16234 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PDGFRAP16234 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
PDGFRAP16234 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
PDGFRAP16234 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.94■□□□□ 0.78
PDGFRAP16234 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.93■□□□□ 0.78
PDGFRAP16234 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDGFRAP16234 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PDGFRAP16234 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PDGFRAP16234 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDGFRAP16234 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.93■□□□□ 0.78
PDGFRAP16234 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PDGFRAP16234 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.93■□□□□ 0.78
PDGFRAP16234 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.93■□□□□ 0.78
PDGFRAP16234 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDGFRAP16234 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PDGFRAP16234 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PDGFRAP16234 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDGFRAP16234 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.93■□□□□ 0.78
PDGFRAP16234 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.93■□□□□ 0.78
PDGFRAP16234 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDGFRAP16234 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.93■□□□□ 0.78
PDGFRAP16234 FAM207BP-201ENST00000447172 505 ntBASIC19.93■□□□□ 0.78
PDGFRAP16234 AC116562.2-201ENST00000507042 360 ntBASIC19.93■□□□□ 0.78
PDGFRAP16234 PRSS44-201ENST00000515154 1146 ntBASIC19.93■□□□□ 0.78
PDGFRAP16234 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.93■□□□□ 0.78
PDGFRAP16234 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.93■□□□□ 0.78
PDGFRAP16234 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.93■□□□□ 0.78
PDGFRAP16234 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
PDGFRAP16234 AC006333.2-201ENST00000607957 2099 ntBASIC19.93■□□□□ 0.78
PDGFRAP16234 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDGFRAP16234 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PDGFRAP16234 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.93■□□□□ 0.78
PDGFRAP16234 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDGFRAP16234 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDGFRAP16234 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDGFRAP16234 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDGFRAP16234 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDGFRAP16234 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDGFRAP16234 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDGFRAP16234 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.92■□□□□ 0.78
PDGFRAP16234 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.92■□□□□ 0.78
PDGFRAP16234 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.92■□□□□ 0.78
PDGFRAP16234 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
PDGFRAP16234 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.92■□□□□ 0.78
PDGFRAP16234 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDGFRAP16234 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.92■□□□□ 0.78
PDGFRAP16234 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.92■□□□□ 0.78
PDGFRAP16234 REXO1L10P-201ENST00000615707 1290 ntBASIC19.92■□□□□ 0.78
PDGFRAP16234 REXO1L12P-201ENST00000622156 912 ntBASIC19.92■□□□□ 0.78
PDGFRAP16234 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDGFRAP16234 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.92■□□□□ 0.78
PDGFRAP16234 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.92■□□□□ 0.78
PDGFRAP16234 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
PDGFRAP16234 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.92■□□□□ 0.78
PDGFRAP16234 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDGFRAP16234 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDGFRAP16234 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDGFRAP16234 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.92■□□□□ 0.78
PDGFRAP16234 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms