Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.52■□□□□ 0.56
CDH1P12830 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH1P12830 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CDH1P12830 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CDH1P12830 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
CDH1P12830 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDH1P12830 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CDH1P12830 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH1P12830 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH1P12830 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH1P12830 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CDH1P12830 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH1P12830 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.52■□□□□ 0.56
CDH1P12830 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH1P12830 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.52■□□□□ 0.56
CDH1P12830 AC012618.2-201ENST00000428058 849 ntBASIC18.52■□□□□ 0.56
CDH1P12830 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.52■□□□□ 0.56
CDH1P12830 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.52■□□□□ 0.56
CDH1P12830 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDH1P12830 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDH1P12830 Z85996.1-201ENST00000494644 937 ntBASIC18.52■□□□□ 0.56
CDH1P12830 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDH1P12830 AC008550.1-201ENST00000511500 884 ntBASIC18.52■□□□□ 0.56
CDH1P12830 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.52■□□□□ 0.56
CDH1P12830 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.52■□□□□ 0.56
CDH1P12830 Z99916.2-201ENST00000604037 246 ntBASIC18.52■□□□□ 0.56
CDH1P12830 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.52■□□□□ 0.56
CDH1P12830 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.52■□□□□ 0.56
CDH1P12830 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.52■□□□□ 0.56
CDH1P12830 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH1P12830 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.52■□□□□ 0.56
CDH1P12830 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH1P12830 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.52■□□□□ 0.56
CDH1P12830 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDH1P12830 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH1P12830 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CDH1P12830 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CDH1P12830 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
CDH1P12830 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.52■□□□□ 0.55
CDH1P12830 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.52■□□□□ 0.55
CDH1P12830 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CDH1P12830 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDH1P12830 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.51■□□□□ 0.55
CDH1P12830 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDH1P12830 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.51■□□□□ 0.55
CDH1P12830 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH1P12830 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH1P12830 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.51■□□□□ 0.55
CDH1P12830 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDH1P12830 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH1P12830 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.51■□□□□ 0.55
CDH1P12830 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH1P12830 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH1P12830 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH1P12830 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH1P12830 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDH1P12830 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.51■□□□□ 0.55
CDH1P12830 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDH1P12830 AC233702.5-201ENST00000584107 538 ntBASIC18.51■□□□□ 0.55
CDH1P12830 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.51■□□□□ 0.55
CDH1P12830 CD177P1-201ENST00000606252 935 ntBASIC18.51■□□□□ 0.55
CDH1P12830 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH1P12830 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH1P12830 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.51■□□□□ 0.55
CDH1P12830 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH1P12830 AC141586.3-201ENST00000562166 1838 ntBASIC18.51■□□□□ 0.55
CDH1P12830 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH1P12830 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH1P12830 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.5■□□□□ 0.55
CDH1P12830 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH1P12830 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH1P12830 KRT8P41-201ENST00000533985 1514 ntBASIC18.5■□□□□ 0.55
CDH1P12830 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH1P12830 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH1P12830 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH1P12830 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.5■□□□□ 0.55
CDH1P12830 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.5■□□□□ 0.55
CDH1P12830 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.5■□□□□ 0.55
CDH1P12830 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.5■□□□□ 0.55
CDH1P12830 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH1P12830 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CDH1P12830 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.5■□□□□ 0.55
CDH1P12830 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.5■□□□□ 0.55
CDH1P12830 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.5■□□□□ 0.55
CDH1P12830 AC113410.3-201ENST00000623366 203 ntBASIC18.5■□□□□ 0.55
CDH1P12830 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.5■□□□□ 0.55
CDH1P12830 AL049637.2-201ENST00000641778 930 ntBASIC18.5■□□□□ 0.55
CDH1P12830 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH1P12830 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.5■□□□□ 0.55
CDH1P12830 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CDH1P12830 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDH1P12830 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.5■□□□□ 0.55
CDH1P12830 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDH1P12830 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.5■□□□□ 0.55
CDH1P12830 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH1P12830 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.5■□□□□ 0.55
CDH1P12830 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.5■□□□□ 0.55
CDH1P12830 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH1P12830 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH1P12830 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms