Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.78■□□□□ 0.92
CLTAP09496 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLTAP09496 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.77■□□□□ 0.92
CLTAP09496 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLTAP09496 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLTAP09496 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.77■□□□□ 0.92
CLTAP09496 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLTAP09496 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.77■□□□□ 0.92
CLTAP09496 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.77■□□□□ 0.92
CLTAP09496 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.77■□□□□ 0.92
CLTAP09496 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.77■□□□□ 0.92
CLTAP09496 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLTAP09496 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLTAP09496 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CLTAP09496 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLTAP09496 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
CLTAP09496 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.77■□□□□ 0.91
CLTAP09496 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.77■□□□□ 0.91
CLTAP09496 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CLTAP09496 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLTAP09496 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.76■□□□□ 0.91
CLTAP09496 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CLTAP09496 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLTAP09496 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLTAP09496 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLTAP09496 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLTAP09496 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CLTAP09496 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLTAP09496 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.76■□□□□ 0.91
CLTAP09496 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CLTAP09496 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.76■□□□□ 0.91
CLTAP09496 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CLTAP09496 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CLTAP09496 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.76■□□□□ 0.91
CLTAP09496 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.76■□□□□ 0.91
CLTAP09496 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.76■□□□□ 0.91
CLTAP09496 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLTAP09496 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.76■□□□□ 0.91
CLTAP09496 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.76■□□□□ 0.91
CLTAP09496 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CLTAP09496 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.76■□□□□ 0.91
CLTAP09496 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.76■□□□□ 0.91
CLTAP09496 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.76■□□□□ 0.91
CLTAP09496 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CLTAP09496 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.76■□□□□ 0.91
CLTAP09496 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLTAP09496 KRT18P22-201ENST00000402024 1347 ntBASIC20.76■□□□□ 0.91
CLTAP09496 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.75■□□□□ 0.91
CLTAP09496 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CLTAP09496 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLTAP09496 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLTAP09496 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CLTAP09496 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.75■□□□□ 0.91
CLTAP09496 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLTAP09496 AL032819.2-201ENST00000624543 2162 ntBASIC20.75■□□□□ 0.91
CLTAP09496 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLTAP09496 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
CLTAP09496 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CLTAP09496 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLTAP09496 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CLTAP09496 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.75■□□□□ 0.91
CLTAP09496 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLTAP09496 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CLTAP09496 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLTAP09496 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CLTAP09496 SLC25A1P2-201ENST00000430693 912 ntBASIC20.75■□□□□ 0.91
CLTAP09496 CA15P1-201ENST00000481698 905 ntBASIC20.75■□□□□ 0.91
CLTAP09496 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.75■□□□□ 0.91
CLTAP09496 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLTAP09496 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.75■□□□□ 0.91
CLTAP09496 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.75■□□□□ 0.91
CLTAP09496 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.75■□□□□ 0.91
CLTAP09496 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
CLTAP09496 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.75■□□□□ 0.91
CLTAP09496 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.75■□□□□ 0.91
CLTAP09496 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLTAP09496 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.75■□□□□ 0.91
CLTAP09496 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CLTAP09496 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLTAP09496 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.75■□□□□ 0.91
CLTAP09496 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CLTAP09496 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CLTAP09496 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.74■□□□□ 0.91
CLTAP09496 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.74■□□□□ 0.91
CLTAP09496 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.74■□□□□ 0.91
CLTAP09496 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CLTAP09496 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CLTAP09496 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLTAP09496 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLTAP09496 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
CLTAP09496 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CLTAP09496 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLTAP09496 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLTAP09496 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLTAP09496 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CLTAP09496 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.74■□□□□ 0.91
CLTAP09496 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.74■□□□□ 0.91
CLTAP09496 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.74■□□□□ 0.91
CLTAP09496 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CLTAP09496 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms