Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
COL5A2P05997 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
COL5A2P05997 BET1L-206ENST00000486280 665 ntTSL 3 BASIC25.04■■□□□ 1.6
COL5A2P05997 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC25.04■■□□□ 1.6
COL5A2P05997 AC079776.4-201ENST00000511039 504 ntBASIC25.04■■□□□ 1.6
COL5A2P05997 RNA5SP419-201ENST00000515908 135 ntBASIC25.04■■□□□ 1.6
COL5A2P05997 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC25.04■■□□□ 1.6
COL5A2P05997 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC25.04■■□□□ 1.6
COL5A2P05997 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC25.04■■□□□ 1.6
COL5A2P05997 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
COL5A2P05997 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC25.04■■□□□ 1.6
COL5A2P05997 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
COL5A2P05997 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
COL5A2P05997 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
COL5A2P05997 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
COL5A2P05997 HOXB1-202ENST00000577092 1414 ntBASIC25.04■■□□□ 1.6
COL5A2P05997 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC25.03■■□□□ 1.6
COL5A2P05997 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC25.03■■□□□ 1.6
COL5A2P05997 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
COL5A2P05997 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
COL5A2P05997 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
COL5A2P05997 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
COL5A2P05997 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
COL5A2P05997 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC25.03■■□□□ 1.6
COL5A2P05997 PENK-208ENST00000523051 772 ntTSL 5 BASIC25.03■■□□□ 1.6
COL5A2P05997 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC25.03■■□□□ 1.6
COL5A2P05997 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC25.03■■□□□ 1.6
COL5A2P05997 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
COL5A2P05997 AC090616.6-201ENST00000582640 721 ntBASIC25.03■■□□□ 1.6
COL5A2P05997 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC25.03■■□□□ 1.6
COL5A2P05997 AC099336.1-202ENST00000602961 463 ntBASIC25.03■■□□□ 1.6
COL5A2P05997 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC25.03■■□□□ 1.6
COL5A2P05997 TP73-AS1-207ENST00000624167 988 ntBASIC25.03■■□□□ 1.6
COL5A2P05997 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
COL5A2P05997 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC25.03■■□□□ 1.6
COL5A2P05997 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC25.03■■□□□ 1.6
COL5A2P05997 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
COL5A2P05997 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
COL5A2P05997 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
COL5A2P05997 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC25.03■■□□□ 1.6
COL5A2P05997 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
COL5A2P05997 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
COL5A2P05997 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
COL5A2P05997 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
COL5A2P05997 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC25.02■■□□□ 1.6
COL5A2P05997 AC104390.1-201ENST00000555663 520 ntBASIC25.02■■□□□ 1.6
COL5A2P05997 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC25.02■■□□□ 1.6
COL5A2P05997 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC25.02■■□□□ 1.6
COL5A2P05997 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
COL5A2P05997 BX640515.1-201ENST00000617215 977 ntBASIC25.02■■□□□ 1.6
COL5A2P05997 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
COL5A2P05997 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
COL5A2P05997 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
COL5A2P05997 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
COL5A2P05997 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
COL5A2P05997 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
COL5A2P05997 TEX30-205ENST00000376029 959 ntTSL 2 BASIC25.02■■□□□ 1.6
COL5A2P05997 IGHV3-47-201ENST00000425060 335 ntBASIC25.02■■□□□ 1.6
COL5A2P05997 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
COL5A2P05997 LINC01711-201ENST00000598340 967 ntBASIC25.02■■□□□ 1.6
COL5A2P05997 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.6
COL5A2P05997 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
COL5A2P05997 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
COL5A2P05997 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
COL5A2P05997 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC25.01■■□□□ 1.59
COL5A2P05997 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
COL5A2P05997 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
COL5A2P05997 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
COL5A2P05997 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
COL5A2P05997 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
COL5A2P05997 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC25.01■■□□□ 1.59
COL5A2P05997 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC25.01■■□□□ 1.59
COL5A2P05997 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC25.01■■□□□ 1.59
COL5A2P05997 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC25.01■■□□□ 1.59
COL5A2P05997 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
COL5A2P05997 TEN1-204ENST00000588202 862 ntTSL 3 BASIC25.01■■□□□ 1.59
COL5A2P05997 AC005332.3-201ENST00000589904 676 ntBASIC25.01■■□□□ 1.59
COL5A2P05997 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC25.01■■□□□ 1.59
COL5A2P05997 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
COL5A2P05997 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
COL5A2P05997 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
COL5A2P05997 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
COL5A2P05997 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC25.01■■□□□ 1.59
COL5A2P05997 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC25■■□□□ 1.59
COL5A2P05997 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC25■■□□□ 1.59
COL5A2P05997 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
COL5A2P05997 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
COL5A2P05997 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
COL5A2P05997 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
COL5A2P05997 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC25■■□□□ 1.59
COL5A2P05997 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
COL5A2P05997 KRT18P23-201ENST00000435622 1283 ntBASIC25■■□□□ 1.59
COL5A2P05997 SAPCD2P3-201ENST00000455031 850 ntBASIC25■■□□□ 1.59
COL5A2P05997 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC25■■□□□ 1.59
COL5A2P05997 GPR32P1-201ENST00000601788 811 ntBASIC25■■□□□ 1.59
COL5A2P05997 AL592071.1-201ENST00000611956 408 ntBASIC25■■□□□ 1.59
COL5A2P05997 REXO1L6P-202ENST00000619970 1078 ntBASIC25■■□□□ 1.59
COL5A2P05997 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC25■■□□□ 1.59
COL5A2P05997 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
COL5A2P05997 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC25■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms