Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.77■□□□□ 0.43
OPN1SWP03999 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
OPN1SWP03999 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
OPN1SWP03999 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
OPN1SWP03999 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
OPN1SWP03999 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
OPN1SWP03999 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
OPN1SWP03999 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
OPN1SWP03999 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
OPN1SWP03999 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
OPN1SWP03999 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
OPN1SWP03999 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.76■□□□□ 0.43
OPN1SWP03999 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
OPN1SWP03999 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
OPN1SWP03999 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.76■□□□□ 0.43
OPN1SWP03999 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
OPN1SWP03999 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.76■□□□□ 0.43
OPN1SWP03999 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
OPN1SWP03999 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.76■□□□□ 0.43
OPN1SWP03999 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.76■□□□□ 0.43
OPN1SWP03999 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
OPN1SWP03999 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.76■□□□□ 0.43
OPN1SWP03999 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
OPN1SWP03999 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
OPN1SWP03999 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
OPN1SWP03999 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
OPN1SWP03999 AC090340.1-201ENST00000620778 4980 ntBASIC17.76■□□□□ 0.43
OPN1SWP03999 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.76■□□□□ 0.43
OPN1SWP03999 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
OPN1SWP03999 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
OPN1SWP03999 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
OPN1SWP03999 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
OPN1SWP03999 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
OPN1SWP03999 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
OPN1SWP03999 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
OPN1SWP03999 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
OPN1SWP03999 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
OPN1SWP03999 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
OPN1SWP03999 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
OPN1SWP03999 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
OPN1SWP03999 AC005332.8-201ENST00000622750 2735 ntBASIC17.75■□□□□ 0.43
OPN1SWP03999 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
OPN1SWP03999 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
OPN1SWP03999 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.75■□□□□ 0.43
OPN1SWP03999 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
OPN1SWP03999 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
OPN1SWP03999 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
OPN1SWP03999 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
OPN1SWP03999 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.75■□□□□ 0.43
OPN1SWP03999 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.75■□□□□ 0.43
OPN1SWP03999 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.75■□□□□ 0.43
OPN1SWP03999 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
OPN1SWP03999 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.75■□□□□ 0.43
OPN1SWP03999 AL390961.4-201ENST00000623958 2535 ntBASIC17.75■□□□□ 0.43
OPN1SWP03999 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
OPN1SWP03999 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
OPN1SWP03999 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
OPN1SWP03999 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
OPN1SWP03999 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.74■□□□□ 0.43
OPN1SWP03999 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
OPN1SWP03999 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
OPN1SWP03999 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
OPN1SWP03999 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.74■□□□□ 0.43
OPN1SWP03999 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.74■□□□□ 0.43
OPN1SWP03999 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
OPN1SWP03999 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
OPN1SWP03999 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
OPN1SWP03999 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
OPN1SWP03999 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
OPN1SWP03999 AC135050.7-201ENST00000624508 2218 ntBASIC17.74■□□□□ 0.43
OPN1SWP03999 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
OPN1SWP03999 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.74■□□□□ 0.43
OPN1SWP03999 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
OPN1SWP03999 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
OPN1SWP03999 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
OPN1SWP03999 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
OPN1SWP03999 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.74■□□□□ 0.43
OPN1SWP03999 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.74■□□□□ 0.43
OPN1SWP03999 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.74■□□□□ 0.43
OPN1SWP03999 AL109923.1-201ENST00000618799 583 ntBASIC17.74■□□□□ 0.43
OPN1SWP03999 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
OPN1SWP03999 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
OPN1SWP03999 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
OPN1SWP03999 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
OPN1SWP03999 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.74■□□□□ 0.43
OPN1SWP03999 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
OPN1SWP03999 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
OPN1SWP03999 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
OPN1SWP03999 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
OPN1SWP03999 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.74■□□□□ 0.43
OPN1SWP03999 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.74■□□□□ 0.43
OPN1SWP03999 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
OPN1SWP03999 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
OPN1SWP03999 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
OPN1SWP03999 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
OPN1SWP03999 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
OPN1SWP03999 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
OPN1SWP03999 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
OPN1SWP03999 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
OPN1SWP03999 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms