Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TOP3BO95985 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.46■□□□□ 0.71
TOP3BO95985 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
TOP3BO95985 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.7
TOP3BO95985 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
TOP3BO95985 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TOP3BO95985 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TOP3BO95985 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TOP3BO95985 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
TOP3BO95985 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TOP3BO95985 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TOP3BO95985 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TOP3BO95985 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TOP3BO95985 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TOP3BO95985 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TOP3BO95985 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.45■□□□□ 0.7
TOP3BO95985 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TOP3BO95985 CRYGFP-201ENST00000418459 633 ntBASIC19.45■□□□□ 0.7
TOP3BO95985 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.45■□□□□ 0.7
TOP3BO95985 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.45■□□□□ 0.7
TOP3BO95985 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.45■□□□□ 0.7
TOP3BO95985 AC023632.3-201ENST00000521633 145 ntBASIC19.45■□□□□ 0.7
TOP3BO95985 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
TOP3BO95985 FITM1-202ENST00000559294 800 ntBASIC19.45■□□□□ 0.7
TOP3BO95985 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.45■□□□□ 0.7
TOP3BO95985 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
TOP3BO95985 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.45■□□□□ 0.7
TOP3BO95985 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TOP3BO95985 NBPF21P-201ENST00000425093 1451 ntBASIC19.45■□□□□ 0.7
TOP3BO95985 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TOP3BO95985 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TOP3BO95985 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TOP3BO95985 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TOP3BO95985 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TOP3BO95985 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TOP3BO95985 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TOP3BO95985 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
TOP3BO95985 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TOP3BO95985 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.45■□□□□ 0.7
TOP3BO95985 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TOP3BO95985 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TOP3BO95985 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.44■□□□□ 0.7
TOP3BO95985 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.44■□□□□ 0.7
TOP3BO95985 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TOP3BO95985 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TOP3BO95985 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TOP3BO95985 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TOP3BO95985 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.44■□□□□ 0.7
TOP3BO95985 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.44■□□□□ 0.7
TOP3BO95985 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TOP3BO95985 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.44■□□□□ 0.7
TOP3BO95985 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.44■□□□□ 0.7
TOP3BO95985 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TOP3BO95985 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.44■□□□□ 0.7
TOP3BO95985 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TOP3BO95985 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TOP3BO95985 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TOP3BO95985 AC124283.5-201ENST00000624661 1809 ntBASIC19.44■□□□□ 0.7
TOP3BO95985 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TOP3BO95985 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TOP3BO95985 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.43■□□□□ 0.7
TOP3BO95985 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
TOP3BO95985 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.43■□□□□ 0.7
TOP3BO95985 AC018553.1-201ENST00000616682 1458 ntBASIC19.43■□□□□ 0.7
TOP3BO95985 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.43■□□□□ 0.7
TOP3BO95985 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TOP3BO95985 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TOP3BO95985 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TOP3BO95985 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TOP3BO95985 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TOP3BO95985 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TOP3BO95985 AC026396.1-201ENST00000419388 421 ntBASIC19.43■□□□□ 0.7
TOP3BO95985 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TOP3BO95985 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TOP3BO95985 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TOP3BO95985 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
TOP3BO95985 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.43■□□□□ 0.7
TOP3BO95985 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.43■□□□□ 0.7
TOP3BO95985 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TOP3BO95985 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TOP3BO95985 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TOP3BO95985 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TOP3BO95985 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.43■□□□□ 0.7
TOP3BO95985 AL161938.1-201ENST00000569833 2180 ntBASIC19.43■□□□□ 0.7
TOP3BO95985 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TOP3BO95985 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TOP3BO95985 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TOP3BO95985 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TOP3BO95985 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TOP3BO95985 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
TOP3BO95985 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TOP3BO95985 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.42■□□□□ 0.7
TOP3BO95985 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.42■□□□□ 0.7
TOP3BO95985 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TOP3BO95985 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
TOP3BO95985 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TOP3BO95985 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TOP3BO95985 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TOP3BO95985 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.42■□□□□ 0.7
TOP3BO95985 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms