Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NKX2-2O95096 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.56■□□□□ 0.4
NKX2-2O95096 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
NKX2-2O95096 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
NKX2-2O95096 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
NKX2-2O95096 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NKX2-2O95096 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.56■□□□□ 0.4
NKX2-2O95096 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
NKX2-2O95096 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.56■□□□□ 0.4
NKX2-2O95096 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
NKX2-2O95096 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NKX2-2O95096 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.55■□□□□ 0.4
NKX2-2O95096 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.55■□□□□ 0.4
NKX2-2O95096 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NKX2-2O95096 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.55■□□□□ 0.4
NKX2-2O95096 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.55■□□□□ 0.4
NKX2-2O95096 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NKX2-2O95096 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.55■□□□□ 0.4
NKX2-2O95096 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NKX2-2O95096 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.55■□□□□ 0.4
NKX2-2O95096 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NKX2-2O95096 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NKX2-2O95096 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NKX2-2O95096 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.55■□□□□ 0.4
NKX2-2O95096 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.55■□□□□ 0.4
NKX2-2O95096 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NKX2-2O95096 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NKX2-2O95096 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NKX2-2O95096 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NKX2-2O95096 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NKX2-2O95096 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
NKX2-2O95096 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
NKX2-2O95096 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.55■□□□□ 0.4
NKX2-2O95096 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NKX2-2O95096 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NKX2-2O95096 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NKX2-2O95096 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
NKX2-2O95096 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.55■□□□□ 0.4
NKX2-2O95096 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NKX2-2O95096 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
NKX2-2O95096 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NKX2-2O95096 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
NKX2-2O95096 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NKX2-2O95096 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NKX2-2O95096 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.54■□□□□ 0.4
NKX2-2O95096 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
NKX2-2O95096 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NKX2-2O95096 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NKX2-2O95096 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
NKX2-2O95096 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.54■□□□□ 0.4
NKX2-2O95096 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NKX2-2O95096 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NKX2-2O95096 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NKX2-2O95096 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NKX2-2O95096 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.54■□□□□ 0.4
NKX2-2O95096 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
NKX2-2O95096 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.54■□□□□ 0.4
NKX2-2O95096 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
NKX2-2O95096 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
NKX2-2O95096 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NKX2-2O95096 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.54■□□□□ 0.4
NKX2-2O95096 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NKX2-2O95096 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
NKX2-2O95096 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
NKX2-2O95096 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.54■□□□□ 0.4
NKX2-2O95096 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.54■□□□□ 0.4
NKX2-2O95096 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NKX2-2O95096 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NKX2-2O95096 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
NKX2-2O95096 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.53■□□□□ 0.4
NKX2-2O95096 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
NKX2-2O95096 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NKX2-2O95096 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.53■□□□□ 0.4
NKX2-2O95096 AP003071.4-201ENST00000562276 1284 ntBASIC17.53■□□□□ 0.4
NKX2-2O95096 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.53■□□□□ 0.4
NKX2-2O95096 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.53■□□□□ 0.4
NKX2-2O95096 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NKX2-2O95096 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NKX2-2O95096 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.53■□□□□ 0.4
NKX2-2O95096 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NKX2-2O95096 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NKX2-2O95096 AL031598.1-201ENST00000561511 1773 ntBASIC17.53■□□□□ 0.4
NKX2-2O95096 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NKX2-2O95096 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NKX2-2O95096 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NKX2-2O95096 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.52■□□□□ 0.4
NKX2-2O95096 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
NKX2-2O95096 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NKX2-2O95096 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
NKX2-2O95096 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.52■□□□□ 0.4
NKX2-2O95096 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.52■□□□□ 0.4
NKX2-2O95096 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NKX2-2O95096 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NKX2-2O95096 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NKX2-2O95096 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.52■□□□□ 0.4
NKX2-2O95096 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
NKX2-2O95096 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
NKX2-2O95096 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.52■□□□□ 0.4
NKX2-2O95096 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.52■□□□□ 0.4
NKX2-2O95096 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms