Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.02■□□□□ 0.95
CLSTN1O94985 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CLSTN1O94985 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC21.01■□□□□ 0.95
CLSTN1O94985 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLSTN1O94985 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
CLSTN1O94985 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLSTN1O94985 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLSTN1O94985 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLSTN1O94985 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLSTN1O94985 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLSTN1O94985 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CLSTN1O94985 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
CLSTN1O94985 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC21.01■□□□□ 0.95
CLSTN1O94985 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLSTN1O94985 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
CLSTN1O94985 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CLSTN1O94985 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLSTN1O94985 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CLSTN1O94985 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CLSTN1O94985 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.01■□□□□ 0.95
CLSTN1O94985 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.01■□□□□ 0.95
CLSTN1O94985 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLSTN1O94985 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.01■□□□□ 0.95
CLSTN1O94985 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.01■□□□□ 0.95
CLSTN1O94985 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.01■□□□□ 0.95
CLSTN1O94985 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CLSTN1O94985 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
CLSTN1O94985 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CLSTN1O94985 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLSTN1O94985 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLSTN1O94985 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLSTN1O94985 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLSTN1O94985 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CLSTN1O94985 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.01■□□□□ 0.95
CLSTN1O94985 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLSTN1O94985 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21■□□□□ 0.95
CLSTN1O94985 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CLSTN1O94985 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CLSTN1O94985 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21■□□□□ 0.95
CLSTN1O94985 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CLSTN1O94985 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
CLSTN1O94985 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLSTN1O94985 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21■□□□□ 0.95
CLSTN1O94985 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC21■□□□□ 0.95
CLSTN1O94985 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
CLSTN1O94985 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21■□□□□ 0.95
CLSTN1O94985 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21■□□□□ 0.95
CLSTN1O94985 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21■□□□□ 0.95
CLSTN1O94985 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21■□□□□ 0.95
CLSTN1O94985 KRT16P5-201ENST00000455284 522 ntBASIC21■□□□□ 0.95
CLSTN1O94985 AP002982.1-201ENST00000492365 877 ntBASIC21■□□□□ 0.95
CLSTN1O94985 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21■□□□□ 0.95
CLSTN1O94985 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21■□□□□ 0.95
CLSTN1O94985 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLSTN1O94985 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLSTN1O94985 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLSTN1O94985 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21■□□□□ 0.95
CLSTN1O94985 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21■□□□□ 0.95
CLSTN1O94985 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CLSTN1O94985 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21■□□□□ 0.95
CLSTN1O94985 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CLSTN1O94985 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLSTN1O94985 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLSTN1O94985 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CLSTN1O94985 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CLSTN1O94985 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CLSTN1O94985 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLSTN1O94985 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLSTN1O94985 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLSTN1O94985 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLSTN1O94985 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLSTN1O94985 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLSTN1O94985 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLSTN1O94985 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.99■□□□□ 0.95
CLSTN1O94985 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.99■□□□□ 0.95
CLSTN1O94985 KRT8P8-201ENST00000434750 1448 ntBASIC20.99■□□□□ 0.95
CLSTN1O94985 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLSTN1O94985 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CLSTN1O94985 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.99■□□□□ 0.95
CLSTN1O94985 KRT18P16-201ENST00000510337 1294 ntBASIC20.99■□□□□ 0.95
CLSTN1O94985 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
CLSTN1O94985 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.99■□□□□ 0.95
CLSTN1O94985 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLSTN1O94985 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLSTN1O94985 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CLSTN1O94985 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CLSTN1O94985 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLSTN1O94985 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLSTN1O94985 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.99■□□□□ 0.95
CLSTN1O94985 HTR7P1-201ENST00000538670 1336 ntBASIC20.99■□□□□ 0.95
CLSTN1O94985 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.99■□□□□ 0.95
CLSTN1O94985 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLSTN1O94985 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLSTN1O94985 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLSTN1O94985 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLSTN1O94985 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLSTN1O94985 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLSTN1O94985 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLSTN1O94985 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CLSTN1O94985 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms