Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP1O94782 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP1O94782 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP1O94782 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP1O94782 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.22■□□□□ 0.67
USP1O94782 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
USP1O94782 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.22■□□□□ 0.67
USP1O94782 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP1O94782 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.22■□□□□ 0.67
USP1O94782 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USP1O94782 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.22■□□□□ 0.67
USP1O94782 Z98044.1-201ENST00000632503 1764 ntBASIC19.22■□□□□ 0.67
USP1O94782 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP1O94782 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP1O94782 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP1O94782 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.22■□□□□ 0.67
USP1O94782 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
USP1O94782 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
USP1O94782 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.22■□□□□ 0.67
USP1O94782 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.22■□□□□ 0.67
USP1O94782 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
USP1O94782 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.22■□□□□ 0.67
USP1O94782 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.22■□□□□ 0.67
USP1O94782 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USP1O94782 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USP1O94782 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USP1O94782 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
USP1O94782 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
USP1O94782 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
USP1O94782 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP1O94782 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
USP1O94782 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP1O94782 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP1O94782 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.22■□□□□ 0.67
USP1O94782 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USP1O94782 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP1O94782 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP1O94782 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.21■□□□□ 0.67
USP1O94782 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP1O94782 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
USP1O94782 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP1O94782 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.21■□□□□ 0.67
USP1O94782 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.21■□□□□ 0.67
USP1O94782 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP1O94782 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP1O94782 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP1O94782 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
USP1O94782 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.21■□□□□ 0.67
USP1O94782 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.21■□□□□ 0.67
USP1O94782 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.21■□□□□ 0.67
USP1O94782 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
USP1O94782 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.21■□□□□ 0.67
USP1O94782 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.21■□□□□ 0.67
USP1O94782 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.21■□□□□ 0.67
USP1O94782 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.21■□□□□ 0.67
USP1O94782 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.21■□□□□ 0.67
USP1O94782 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.21■□□□□ 0.67
USP1O94782 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP1O94782 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
USP1O94782 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USP1O94782 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP1O94782 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
USP1O94782 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP1O94782 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.2■□□□□ 0.66
USP1O94782 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
USP1O94782 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP1O94782 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP1O94782 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP1O94782 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP1O94782 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.2■□□□□ 0.66
USP1O94782 ESRRAP1-201ENST00000400596 1257 ntBASIC19.2■□□□□ 0.66
USP1O94782 POU5F1P3-201ENST00000428824 1078 ntBASIC19.2■□□□□ 0.66
USP1O94782 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.2■□□□□ 0.66
USP1O94782 AC233263.1-201ENST00000578059 224 ntBASIC19.2■□□□□ 0.66
USP1O94782 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.2■□□□□ 0.66
USP1O94782 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.2■□□□□ 0.66
USP1O94782 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
USP1O94782 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.2■□□□□ 0.66
USP1O94782 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP1O94782 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.2■□□□□ 0.66
USP1O94782 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP1O94782 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP1O94782 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP1O94782 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.2■□□□□ 0.66
USP1O94782 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP1O94782 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP1O94782 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
USP1O94782 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP1O94782 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP1O94782 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
USP1O94782 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
USP1O94782 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.19■□□□□ 0.66
USP1O94782 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
USP1O94782 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.19■□□□□ 0.66
USP1O94782 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.19■□□□□ 0.66
USP1O94782 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP1O94782 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
USP1O94782 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
USP1O94782 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP1O94782 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms