Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNOT3O75175 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.41■□□□□ 0.54
CNOT3O75175 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNOT3O75175 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.41■□□□□ 0.54
CNOT3O75175 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.41■□□□□ 0.54
CNOT3O75175 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNOT3O75175 MMP23A-201ENST00000234610 1017 ntBASIC18.41■□□□□ 0.54
CNOT3O75175 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNOT3O75175 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CNOT3O75175 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CNOT3O75175 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.41■□□□□ 0.54
CNOT3O75175 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.41■□□□□ 0.54
CNOT3O75175 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNOT3O75175 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.41■□□□□ 0.54
CNOT3O75175 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CNOT3O75175 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CNOT3O75175 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CNOT3O75175 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNOT3O75175 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNOT3O75175 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.41■□□□□ 0.54
CNOT3O75175 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.41■□□□□ 0.54
CNOT3O75175 AC005332.8-201ENST00000622750 2735 ntBASIC18.41■□□□□ 0.54
CNOT3O75175 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNOT3O75175 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CNOT3O75175 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.41■□□□□ 0.54
CNOT3O75175 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.41■□□□□ 0.54
CNOT3O75175 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNOT3O75175 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNOT3O75175 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CNOT3O75175 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CNOT3O75175 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNOT3O75175 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNOT3O75175 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CNOT3O75175 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNOT3O75175 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CNOT3O75175 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CNOT3O75175 AL390955.1-201ENST00000428694 934 ntBASIC18.4■□□□□ 0.54
CNOT3O75175 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.4■□□□□ 0.54
CNOT3O75175 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNOT3O75175 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.4■□□□□ 0.54
CNOT3O75175 TMEM179-206ENST00000616017 1645 ntBASIC18.4■□□□□ 0.54
CNOT3O75175 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNOT3O75175 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNOT3O75175 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CNOT3O75175 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNOT3O75175 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNOT3O75175 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNOT3O75175 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNOT3O75175 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
CNOT3O75175 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNOT3O75175 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CNOT3O75175 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CNOT3O75175 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNOT3O75175 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CNOT3O75175 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
CNOT3O75175 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CNOT3O75175 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.39■□□□□ 0.53
CNOT3O75175 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNOT3O75175 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CNOT3O75175 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNOT3O75175 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNOT3O75175 UNC93B2-201ENST00000285383 730 ntBASIC18.39■□□□□ 0.53
CNOT3O75175 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNOT3O75175 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.39■□□□□ 0.53
CNOT3O75175 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CNOT3O75175 AC004980.1-204ENST00000429707 299 ntBASIC18.39■□□□□ 0.53
CNOT3O75175 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.39■□□□□ 0.53
CNOT3O75175 FAM210CP-201ENST00000445714 574 ntBASIC18.39■□□□□ 0.53
CNOT3O75175 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CNOT3O75175 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.39■□□□□ 0.53
CNOT3O75175 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.39■□□□□ 0.53
CNOT3O75175 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNOT3O75175 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CNOT3O75175 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.39■□□□□ 0.53
CNOT3O75175 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNOT3O75175 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CNOT3O75175 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CNOT3O75175 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNOT3O75175 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CNOT3O75175 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNOT3O75175 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
CNOT3O75175 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CNOT3O75175 AL691432.2-201ENST00000607222 2038 ntBASIC18.39■□□□□ 0.53
CNOT3O75175 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CNOT3O75175 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNOT3O75175 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CNOT3O75175 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNOT3O75175 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.38■□□□□ 0.53
CNOT3O75175 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNOT3O75175 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNOT3O75175 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CNOT3O75175 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNOT3O75175 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNOT3O75175 MIR1238-201ENST00000408483 83 ntBASIC18.38■□□□□ 0.53
CNOT3O75175 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.38■□□□□ 0.53
CNOT3O75175 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.38■□□□□ 0.53
CNOT3O75175 HLA-A-209ENST00000638375 975 ntBASIC18.38■□□□□ 0.53
CNOT3O75175 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNOT3O75175 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CNOT3O75175 AC125437.2-201ENST00000625180 2167 ntBASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms