Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC26.3■■□□□ 1.8
BRD4O60885 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC26.3■■□□□ 1.8
BRD4O60885 TOLLIP-AS1-201ENST00000530897 939 ntBASIC26.3■■□□□ 1.8
BRD4O60885 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
BRD4O60885 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC26.29■■□□□ 1.8
BRD4O60885 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
BRD4O60885 KRT8P45-201ENST00000414328 1447 ntBASIC26.29■■□□□ 1.8
BRD4O60885 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
BRD4O60885 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
BRD4O60885 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC26.29■■□□□ 1.8
BRD4O60885 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
BRD4O60885 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
BRD4O60885 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
BRD4O60885 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
BRD4O60885 AL359075.1-203ENST00000462729 1002 ntBASIC26.29■■□□□ 1.8
BRD4O60885 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC26.29■■□□□ 1.8
BRD4O60885 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC26.29■■□□□ 1.8
BRD4O60885 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
BRD4O60885 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC26.29■■□□□ 1.8
BRD4O60885 AC005332.1-201ENST00000577698 1310 ntBASIC26.29■■□□□ 1.8
BRD4O60885 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
BRD4O60885 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC26.29■■□□□ 1.8
BRD4O60885 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
BRD4O60885 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
BRD4O60885 ZNF815P-204ENST00000434898 1737 ntBASIC26.28■■□□□ 1.8
BRD4O60885 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC26.28■■□□□ 1.8
BRD4O60885 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
BRD4O60885 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
BRD4O60885 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
BRD4O60885 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
BRD4O60885 AL032819.2-201ENST00000624543 2162 ntBASIC26.28■■□□□ 1.8
BRD4O60885 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
BRD4O60885 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
BRD4O60885 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC26.28■■□□□ 1.8
BRD4O60885 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
BRD4O60885 AL136038.3-201ENST00000561909 1096 ntBASIC26.28■■□□□ 1.8
BRD4O60885 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC26.28■■□□□ 1.8
BRD4O60885 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
BRD4O60885 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
BRD4O60885 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
BRD4O60885 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
BRD4O60885 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
BRD4O60885 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
BRD4O60885 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
BRD4O60885 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
BRD4O60885 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
BRD4O60885 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC26.27■■□□□ 1.8
BRD4O60885 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
BRD4O60885 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
BRD4O60885 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
BRD4O60885 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
BRD4O60885 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
BRD4O60885 KRT18P38-201ENST00000449496 1282 ntBASIC26.27■■□□□ 1.8
BRD4O60885 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC26.27■■□□□ 1.8
BRD4O60885 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC26.27■■□□□ 1.8
BRD4O60885 AC140113.3-201ENST00000605663 199 ntBASIC26.27■■□□□ 1.8
BRD4O60885 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC26.27■■□□□ 1.8
BRD4O60885 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC26.27■■□□□ 1.8
BRD4O60885 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC26.27■■□□□ 1.8
BRD4O60885 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
BRD4O60885 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
BRD4O60885 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
BRD4O60885 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC26.26■■□□□ 1.79
BRD4O60885 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
BRD4O60885 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC26.26■■□□□ 1.79
BRD4O60885 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
BRD4O60885 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
BRD4O60885 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC26.26■■□□□ 1.79
BRD4O60885 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC26.26■■□□□ 1.79
BRD4O60885 STARP1-201ENST00000397973 869 ntBASIC26.26■■□□□ 1.79
BRD4O60885 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC26.26■■□□□ 1.79
BRD4O60885 KRT18P56-201ENST00000507275 550 ntBASIC26.26■■□□□ 1.79
BRD4O60885 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC26.26■■□□□ 1.79
BRD4O60885 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
BRD4O60885 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC26.26■■□□□ 1.79
BRD4O60885 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
BRD4O60885 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC26.26■■□□□ 1.79
BRD4O60885 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
BRD4O60885 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
BRD4O60885 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
BRD4O60885 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
BRD4O60885 LINC01465-201ENST00000408887 1940 ntBASIC26.26■■□□□ 1.79
BRD4O60885 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
BRD4O60885 ANKRD18DP-204ENST00000455355 1975 ntBASIC26.26■■□□□ 1.79
BRD4O60885 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
BRD4O60885 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
BRD4O60885 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
BRD4O60885 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
BRD4O60885 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC26.25■■□□□ 1.79
BRD4O60885 NT5C-210ENST00000582160 860 ntTSL 2 BASIC26.25■■□□□ 1.79
BRD4O60885 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC26.25■■□□□ 1.79
BRD4O60885 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
BRD4O60885 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
BRD4O60885 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
BRD4O60885 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
BRD4O60885 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
BRD4O60885 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC26.24■■□□□ 1.79
BRD4O60885 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC26.24■■□□□ 1.79
BRD4O60885 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
BRD4O60885 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms