Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
HCN1O60741 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HCN1O60741 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HCN1O60741 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
HCN1O60741 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HCN1O60741 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HCN1O60741 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HCN1O60741 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HCN1O60741 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HCN1O60741 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HCN1O60741 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
HCN1O60741 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.76■□□□□ 0.43
HCN1O60741 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.76■□□□□ 0.43
HCN1O60741 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HCN1O60741 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HCN1O60741 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.76■□□□□ 0.43
HCN1O60741 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.76■□□□□ 0.43
HCN1O60741 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HCN1O60741 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.76■□□□□ 0.43
HCN1O60741 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HCN1O60741 AL355075.4-201ENST00000554988 638 ntBASIC17.76■□□□□ 0.43
HCN1O60741 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.76■□□□□ 0.43
HCN1O60741 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.76■□□□□ 0.43
HCN1O60741 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.76■□□□□ 0.43
HCN1O60741 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HCN1O60741 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.76■□□□□ 0.43
HCN1O60741 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.76■□□□□ 0.43
HCN1O60741 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HCN1O60741 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
HCN1O60741 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.76■□□□□ 0.43
HCN1O60741 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HCN1O60741 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
HCN1O60741 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
HCN1O60741 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HCN1O60741 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HCN1O60741 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
HCN1O60741 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.76■□□□□ 0.43
HCN1O60741 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HCN1O60741 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
HCN1O60741 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HCN1O60741 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.75■□□□□ 0.43
HCN1O60741 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
HCN1O60741 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HCN1O60741 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HCN1O60741 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.75■□□□□ 0.43
HCN1O60741 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.75■□□□□ 0.43
HCN1O60741 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HCN1O60741 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.75■□□□□ 0.43
HCN1O60741 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HCN1O60741 KRT18P16-201ENST00000510337 1294 ntBASIC17.75■□□□□ 0.43
HCN1O60741 NUDT16P1-203ENST00000513809 620 ntBASIC17.75■□□□□ 0.43
HCN1O60741 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.75■□□□□ 0.43
HCN1O60741 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
HCN1O60741 C1QL1P1-201ENST00000568105 661 ntBASIC17.75■□□□□ 0.43
HCN1O60741 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.75■□□□□ 0.43
HCN1O60741 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.75■□□□□ 0.43
HCN1O60741 LINC01023-201ENST00000606054 436 ntBASIC17.75■□□□□ 0.43
HCN1O60741 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HCN1O60741 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HCN1O60741 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
HCN1O60741 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
HCN1O60741 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HCN1O60741 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HCN1O60741 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
HCN1O60741 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HCN1O60741 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.75■□□□□ 0.43
HCN1O60741 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
HCN1O60741 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HCN1O60741 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HCN1O60741 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.75■□□□□ 0.43
HCN1O60741 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.75■□□□□ 0.43
HCN1O60741 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.74■□□□□ 0.43
HCN1O60741 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HCN1O60741 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.74■□□□□ 0.43
HCN1O60741 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HCN1O60741 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
HCN1O60741 KRT16P1-201ENST00000399124 1418 ntBASIC17.74■□□□□ 0.43
HCN1O60741 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HCN1O60741 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
HCN1O60741 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HCN1O60741 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.74■□□□□ 0.43
HCN1O60741 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
HCN1O60741 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.74■□□□□ 0.43
HCN1O60741 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.74■□□□□ 0.43
HCN1O60741 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HCN1O60741 AC211429.1-201ENST00000415277 523 ntBASIC17.74■□□□□ 0.43
HCN1O60741 TUBB8P6-201ENST00000436895 1288 ntBASIC17.74■□□□□ 0.43
HCN1O60741 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.74■□□□□ 0.43
HCN1O60741 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.74■□□□□ 0.43
HCN1O60741 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.74■□□□□ 0.43
HCN1O60741 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HCN1O60741 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.74■□□□□ 0.43
HCN1O60741 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.74■□□□□ 0.43
HCN1O60741 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
HCN1O60741 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HCN1O60741 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
HCN1O60741 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HCN1O60741 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.74■□□□□ 0.43
HCN1O60741 AC093503.3-201ENST00000624917 2352 ntBASIC17.74■□□□□ 0.43
HCN1O60741 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms