Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDH7O60245 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.16■□□□□ 0.5
PCDH7O60245 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDH7O60245 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH7O60245 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH7O60245 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH7O60245 HTR7P1-201ENST00000538670 1336 ntBASIC18.16■□□□□ 0.5
PCDH7O60245 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PCDH7O60245 AL138781.2-201ENST00000617896 1843 ntBASIC18.16■□□□□ 0.5
PCDH7O60245 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
PCDH7O60245 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
PCDH7O60245 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PCDH7O60245 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH7O60245 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH7O60245 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH7O60245 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH7O60245 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH7O60245 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH7O60245 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH7O60245 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH7O60245 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH7O60245 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH7O60245 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDH7O60245 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PCDH7O60245 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH7O60245 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH7O60245 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDH7O60245 FAM201B-201ENST00000458407 597 ntBASIC18.15■□□□□ 0.5
PCDH7O60245 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDH7O60245 RPPH1-201ENST00000516869 333 ntBASIC18.15■□□□□ 0.5
PCDH7O60245 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.15■□□□□ 0.5
PCDH7O60245 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.15■□□□□ 0.5
PCDH7O60245 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.15■□□□□ 0.5
PCDH7O60245 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDH7O60245 AC131212.4-201ENST00000623606 975 ntBASIC18.15■□□□□ 0.5
PCDH7O60245 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH7O60245 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDH7O60245 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH7O60245 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PCDH7O60245 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDH7O60245 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDH7O60245 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH7O60245 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH7O60245 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
PCDH7O60245 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH7O60245 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDH7O60245 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH7O60245 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH7O60245 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH7O60245 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH7O60245 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH7O60245 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PCDH7O60245 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PCDH7O60245 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PCDH7O60245 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PCDH7O60245 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH7O60245 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH7O60245 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH7O60245 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH7O60245 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDH7O60245 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH7O60245 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH7O60245 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
PCDH7O60245 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDH7O60245 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.14■□□□□ 0.49
PCDH7O60245 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.14■□□□□ 0.49
PCDH7O60245 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
PCDH7O60245 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDH7O60245 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
PCDH7O60245 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH7O60245 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH7O60245 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDH7O60245 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH7O60245 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH7O60245 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH7O60245 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.14■□□□□ 0.49
PCDH7O60245 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH7O60245 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH7O60245 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH7O60245 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
PCDH7O60245 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH7O60245 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
PCDH7O60245 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH7O60245 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDH7O60245 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PCDH7O60245 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH7O60245 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
PCDH7O60245 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH7O60245 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
PCDH7O60245 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH7O60245 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH7O60245 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH7O60245 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH7O60245 AC004980.1-204ENST00000429707 299 ntBASIC18.13■□□□□ 0.49
PCDH7O60245 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.13■□□□□ 0.49
PCDH7O60245 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.13■□□□□ 0.49
PCDH7O60245 AL353708.3-201ENST00000610272 989 ntBASIC18.13■□□□□ 0.49
PCDH7O60245 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDH7O60245 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH7O60245 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms