Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.53■□□□□ 0.24
XRCC2O43543 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
XRCC2O43543 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
XRCC2O43543 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
XRCC2O43543 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
XRCC2O43543 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
XRCC2O43543 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.52■□□□□ 0.24
XRCC2O43543 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
XRCC2O43543 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
XRCC2O43543 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
XRCC2O43543 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
XRCC2O43543 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.52■□□□□ 0.24
XRCC2O43543 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
XRCC2O43543 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
XRCC2O43543 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
XRCC2O43543 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
XRCC2O43543 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.52■□□□□ 0.24
XRCC2O43543 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
XRCC2O43543 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
XRCC2O43543 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.52■□□□□ 0.24
XRCC2O43543 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.52■□□□□ 0.24
XRCC2O43543 KSR1P1-201ENST00000446298 240 ntBASIC16.52■□□□□ 0.24
XRCC2O43543 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
XRCC2O43543 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.52■□□□□ 0.24
XRCC2O43543 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
XRCC2O43543 ITM2C-210ENST00000620962 501 ntBASIC16.52■□□□□ 0.24
XRCC2O43543 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
XRCC2O43543 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
XRCC2O43543 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
XRCC2O43543 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
XRCC2O43543 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
XRCC2O43543 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
XRCC2O43543 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
XRCC2O43543 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
XRCC2O43543 AL049812.1-201ENST00000432563 2267 ntBASIC16.52■□□□□ 0.23
XRCC2O43543 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
XRCC2O43543 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
XRCC2O43543 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
XRCC2O43543 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
XRCC2O43543 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
XRCC2O43543 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
XRCC2O43543 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
XRCC2O43543 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
XRCC2O43543 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
XRCC2O43543 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
XRCC2O43543 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
XRCC2O43543 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
XRCC2O43543 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
XRCC2O43543 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
XRCC2O43543 KRT18P29-201ENST00000397031 1267 ntBASIC16.51■□□□□ 0.23
XRCC2O43543 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
XRCC2O43543 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
XRCC2O43543 FAM197Y4-202ENST00000622692 608 ntBASIC16.51■□□□□ 0.23
XRCC2O43543 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.51■□□□□ 0.23
XRCC2O43543 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
XRCC2O43543 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
XRCC2O43543 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
XRCC2O43543 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
XRCC2O43543 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
XRCC2O43543 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
XRCC2O43543 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.51■□□□□ 0.23
XRCC2O43543 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.51■□□□□ 0.23
XRCC2O43543 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
XRCC2O43543 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
XRCC2O43543 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
XRCC2O43543 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
XRCC2O43543 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
XRCC2O43543 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
XRCC2O43543 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.51■□□□□ 0.23
XRCC2O43543 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
XRCC2O43543 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
XRCC2O43543 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
XRCC2O43543 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
XRCC2O43543 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.5■□□□□ 0.23
XRCC2O43543 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
XRCC2O43543 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
XRCC2O43543 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.5■□□□□ 0.23
XRCC2O43543 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.5■□□□□ 0.23
XRCC2O43543 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.5■□□□□ 0.23
XRCC2O43543 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
XRCC2O43543 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.5■□□□□ 0.23
XRCC2O43543 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
XRCC2O43543 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
XRCC2O43543 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
XRCC2O43543 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
XRCC2O43543 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
XRCC2O43543 TSPY23P-201ENST00000440136 739 ntBASIC16.5■□□□□ 0.23
XRCC2O43543 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
XRCC2O43543 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.5■□□□□ 0.23
XRCC2O43543 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.5■□□□□ 0.23
XRCC2O43543 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
XRCC2O43543 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.5■□□□□ 0.23
XRCC2O43543 RARRES2P10-201ENST00000564312 460 ntBASIC16.5■□□□□ 0.23
XRCC2O43543 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
XRCC2O43543 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.5■□□□□ 0.23
XRCC2O43543 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
XRCC2O43543 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
XRCC2O43543 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.5■□□□□ 0.23
XRCC2O43543 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
XRCC2O43543 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms