Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
MSI1O43347 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
MSI1O43347 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
MSI1O43347 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
MSI1O43347 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MSI1O43347 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MSI1O43347 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
MSI1O43347 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
MSI1O43347 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
MSI1O43347 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
MSI1O43347 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
MSI1O43347 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
MSI1O43347 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MSI1O43347 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.73■□□□□ 0.75
MSI1O43347 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MSI1O43347 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.73■□□□□ 0.75
MSI1O43347 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
MSI1O43347 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
MSI1O43347 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MSI1O43347 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.73■□□□□ 0.75
MSI1O43347 AL353719.1-201ENST00000566847 864 ntBASIC19.73■□□□□ 0.75
MSI1O43347 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.73■□□□□ 0.75
MSI1O43347 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
MSI1O43347 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.73■□□□□ 0.75
MSI1O43347 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MSI1O43347 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.73■□□□□ 0.75
MSI1O43347 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MSI1O43347 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MSI1O43347 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
MSI1O43347 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
MSI1O43347 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
MSI1O43347 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MSI1O43347 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.72■□□□□ 0.75
MSI1O43347 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MSI1O43347 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.72■□□□□ 0.75
MSI1O43347 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
MSI1O43347 TERF1P1-201ENST00000311003 1181 ntBASIC19.72■□□□□ 0.75
MSI1O43347 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MSI1O43347 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.72■□□□□ 0.75
MSI1O43347 TSPY17P-201ENST00000450329 467 ntBASIC19.72■□□□□ 0.75
MSI1O43347 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.72■□□□□ 0.75
MSI1O43347 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.72■□□□□ 0.75
MSI1O43347 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MSI1O43347 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.72■□□□□ 0.75
MSI1O43347 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.72■□□□□ 0.75
MSI1O43347 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.72■□□□□ 0.75
MSI1O43347 AC008622.2-201ENST00000617006 1229 ntBASIC19.72■□□□□ 0.75
MSI1O43347 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
MSI1O43347 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.72■□□□□ 0.75
MSI1O43347 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
MSI1O43347 AL049812.1-201ENST00000432563 2267 ntBASIC19.72■□□□□ 0.75
MSI1O43347 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.72■□□□□ 0.75
MSI1O43347 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.72■□□□□ 0.75
MSI1O43347 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
MSI1O43347 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.71■□□□□ 0.75
MSI1O43347 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
MSI1O43347 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MSI1O43347 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
MSI1O43347 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MSI1O43347 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MSI1O43347 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MSI1O43347 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.71■□□□□ 0.75
MSI1O43347 FEM1AP3-201ENST00000403722 1741 ntBASIC19.71■□□□□ 0.75
MSI1O43347 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MSI1O43347 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MSI1O43347 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MSI1O43347 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.71■□□□□ 0.75
MSI1O43347 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
MSI1O43347 RN7SL850P-201ENST00000579959 291 ntBASIC19.71■□□□□ 0.75
MSI1O43347 MIR4674-201ENST00000582457 87 ntBASIC19.71■□□□□ 0.75
MSI1O43347 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MSI1O43347 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MSI1O43347 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
MSI1O43347 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
MSI1O43347 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MSI1O43347 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MSI1O43347 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
MSI1O43347 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.7■□□□□ 0.74
MSI1O43347 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
MSI1O43347 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MSI1O43347 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MSI1O43347 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
MSI1O43347 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MSI1O43347 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.7■□□□□ 0.74
MSI1O43347 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MSI1O43347 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.7■□□□□ 0.74
MSI1O43347 FP475955.4-201ENST00000623131 1990 ntBASIC19.7■□□□□ 0.74
MSI1O43347 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.7■□□□□ 0.74
MSI1O43347 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MSI1O43347 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.7■□□□□ 0.74
MSI1O43347 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MSI1O43347 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MSI1O43347 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.7■□□□□ 0.74
MSI1O43347 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.7■□□□□ 0.74
MSI1O43347 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.7■□□□□ 0.74
MSI1O43347 FAM210CP-201ENST00000445714 574 ntBASIC19.7■□□□□ 0.74
MSI1O43347 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
MSI1O43347 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MSI1O43347 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
MSI1O43347 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms