Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
MID1O15344 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.04■□□□□ 0.64
MID1O15344 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MID1O15344 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
MID1O15344 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.04■□□□□ 0.64
MID1O15344 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.04■□□□□ 0.64
MID1O15344 NEK4P2-201ENST00000580004 1012 ntBASIC19.04■□□□□ 0.64
MID1O15344 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.04■□□□□ 0.64
MID1O15344 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
MID1O15344 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.04■□□□□ 0.64
MID1O15344 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.04■□□□□ 0.64
MID1O15344 GPAT2P1-201ENST00000444924 1672 ntBASIC19.04■□□□□ 0.64
MID1O15344 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MID1O15344 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.04■□□□□ 0.64
MID1O15344 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MID1O15344 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.03■□□□□ 0.64
MID1O15344 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
MID1O15344 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.03■□□□□ 0.64
MID1O15344 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.03■□□□□ 0.64
MID1O15344 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MID1O15344 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MID1O15344 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MID1O15344 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MID1O15344 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
MID1O15344 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MID1O15344 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.03■□□□□ 0.64
MID1O15344 AL671277.2-201ENST00000458060 996 ntBASIC19.03■□□□□ 0.64
MID1O15344 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.03■□□□□ 0.64
MID1O15344 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
MID1O15344 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.03■□□□□ 0.64
MID1O15344 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.03■□□□□ 0.64
MID1O15344 GCSHP2-201ENST00000560971 527 ntBASIC19.03■□□□□ 0.64
MID1O15344 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.03■□□□□ 0.64
MID1O15344 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.03■□□□□ 0.64
MID1O15344 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.03■□□□□ 0.64
MID1O15344 AC091076.1-201ENST00000610741 619 ntBASIC19.03■□□□□ 0.64
MID1O15344 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.03■□□□□ 0.64
MID1O15344 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
MID1O15344 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MID1O15344 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.03■□□□□ 0.64
MID1O15344 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MID1O15344 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.03■□□□□ 0.64
MID1O15344 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MID1O15344 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MID1O15344 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.03■□□□□ 0.64
MID1O15344 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MID1O15344 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MID1O15344 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MID1O15344 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.02■□□□□ 0.64
MID1O15344 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
MID1O15344 AIRN-201ENST00000601203 4374 ntBASIC19.02■□□□□ 0.64
MID1O15344 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
MID1O15344 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
MID1O15344 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.02■□□□□ 0.64
MID1O15344 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
MID1O15344 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
MID1O15344 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.02■□□□□ 0.64
MID1O15344 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.02■□□□□ 0.64
MID1O15344 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
MID1O15344 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.02■□□□□ 0.64
MID1O15344 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.02■□□□□ 0.64
MID1O15344 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
MID1O15344 UPK3BP1-201ENST00000428678 509 ntBASIC19.02■□□□□ 0.64
MID1O15344 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.02■□□□□ 0.64
MID1O15344 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.02■□□□□ 0.64
MID1O15344 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.02■□□□□ 0.64
MID1O15344 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.02■□□□□ 0.64
MID1O15344 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MID1O15344 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.02■□□□□ 0.64
MID1O15344 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.02■□□□□ 0.64
MID1O15344 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MID1O15344 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.02■□□□□ 0.64
MID1O15344 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MID1O15344 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
MID1O15344 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
MID1O15344 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
MID1O15344 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
MID1O15344 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
MID1O15344 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.02■□□□□ 0.63
MID1O15344 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.01■□□□□ 0.63
MID1O15344 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
MID1O15344 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.01■□□□□ 0.63
MID1O15344 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.01■□□□□ 0.63
MID1O15344 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
MID1O15344 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MID1O15344 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.01■□□□□ 0.63
MID1O15344 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MID1O15344 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MID1O15344 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
MID1O15344 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
MID1O15344 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
MID1O15344 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MID1O15344 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.01■□□□□ 0.63
MID1O15344 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MID1O15344 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.01■□□□□ 0.63
MID1O15344 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.01■□□□□ 0.63
MID1O15344 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.01■□□□□ 0.63
MID1O15344 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.01■□□□□ 0.63
MID1O15344 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.01■□□□□ 0.63
MID1O15344 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms