Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SPTLC1O15269 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SPTLC1O15269 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SPTLC1O15269 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
SPTLC1O15269 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.33■□□□□ 0.85
SPTLC1O15269 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SPTLC1O15269 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SPTLC1O15269 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
SPTLC1O15269 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SPTLC1O15269 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
SPTLC1O15269 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SPTLC1O15269 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SPTLC1O15269 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SPTLC1O15269 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SPTLC1O15269 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
SPTLC1O15269 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.33■□□□□ 0.85
SPTLC1O15269 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SPTLC1O15269 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.33■□□□□ 0.85
SPTLC1O15269 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SPTLC1O15269 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SPTLC1O15269 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.33■□□□□ 0.85
SPTLC1O15269 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
SPTLC1O15269 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SPTLC1O15269 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SPTLC1O15269 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SPTLC1O15269 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SPTLC1O15269 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SPTLC1O15269 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.33■□□□□ 0.85
SPTLC1O15269 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.33■□□□□ 0.85
SPTLC1O15269 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.33■□□□□ 0.85
SPTLC1O15269 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SPTLC1O15269 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
SPTLC1O15269 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
SPTLC1O15269 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SPTLC1O15269 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SPTLC1O15269 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.33■□□□□ 0.84
SPTLC1O15269 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.33■□□□□ 0.84
SPTLC1O15269 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
SPTLC1O15269 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.33■□□□□ 0.84
SPTLC1O15269 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SPTLC1O15269 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
SPTLC1O15269 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.33■□□□□ 0.84
SPTLC1O15269 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
SPTLC1O15269 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.32■□□□□ 0.84
SPTLC1O15269 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SPTLC1O15269 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
SPTLC1O15269 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SPTLC1O15269 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SPTLC1O15269 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.32■□□□□ 0.84
SPTLC1O15269 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.32■□□□□ 0.84
SPTLC1O15269 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SPTLC1O15269 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.32■□□□□ 0.84
SPTLC1O15269 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.32■□□□□ 0.84
SPTLC1O15269 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
SPTLC1O15269 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SPTLC1O15269 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SPTLC1O15269 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.32■□□□□ 0.84
SPTLC1O15269 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SPTLC1O15269 IRX1P1-201ENST00000438849 1838 ntBASIC20.32■□□□□ 0.84
SPTLC1O15269 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
SPTLC1O15269 AC141586.3-201ENST00000562166 1838 ntBASIC20.32■□□□□ 0.84
SPTLC1O15269 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SPTLC1O15269 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SPTLC1O15269 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SPTLC1O15269 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SPTLC1O15269 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPTLC1O15269 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPTLC1O15269 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.31■□□□□ 0.84
SPTLC1O15269 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPTLC1O15269 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.31■□□□□ 0.84
SPTLC1O15269 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPTLC1O15269 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.31■□□□□ 0.84
SPTLC1O15269 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPTLC1O15269 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPTLC1O15269 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SPTLC1O15269 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SPTLC1O15269 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SPTLC1O15269 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.31■□□□□ 0.84
SPTLC1O15269 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SPTLC1O15269 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
SPTLC1O15269 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.31■□□□□ 0.84
SPTLC1O15269 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPTLC1O15269 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.31■□□□□ 0.84
SPTLC1O15269 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.31■□□□□ 0.84
SPTLC1O15269 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.3■□□□□ 0.84
SPTLC1O15269 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPTLC1O15269 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SPTLC1O15269 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPTLC1O15269 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPTLC1O15269 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPTLC1O15269 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPTLC1O15269 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPTLC1O15269 AC117947.1-201ENST00000427448 529 ntBASIC20.3■□□□□ 0.84
SPTLC1O15269 AC139887.4-201ENST00000607877 719 ntBASIC20.3■□□□□ 0.84
SPTLC1O15269 AC141257.4-201ENST00000634557 245 ntBASIC20.3■□□□□ 0.84
SPTLC1O15269 AC136944.6-201ENST00000634818 245 ntBASIC20.3■□□□□ 0.84
SPTLC1O15269 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPTLC1O15269 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPTLC1O15269 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.3■□□□□ 0.84
SPTLC1O15269 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms