Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NDUFA1O15239 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
NDUFA1O15239 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NDUFA1O15239 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NDUFA1O15239 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
NDUFA1O15239 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NDUFA1O15239 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC13.02□□□□□ -0.33
NDUFA1O15239 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
NDUFA1O15239 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NDUFA1O15239 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NDUFA1O15239 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC13.02□□□□□ -0.33
NDUFA1O15239 MADD-208ENST00000405573 1823 ntTSL 5 BASIC13.02□□□□□ -0.33
NDUFA1O15239 IRX1P1-201ENST00000438849 1838 ntBASIC13.02□□□□□ -0.33
NDUFA1O15239 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
NDUFA1O15239 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NDUFA1O15239 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
NDUFA1O15239 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFA1O15239 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
NDUFA1O15239 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFA1O15239 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
NDUFA1O15239 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFA1O15239 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFA1O15239 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC13.01□□□□□ -0.33
NDUFA1O15239 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFA1O15239 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC13.01□□□□□ -0.33
NDUFA1O15239 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFA1O15239 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFA1O15239 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFA1O15239 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFA1O15239 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFA1O15239 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
NDUFA1O15239 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
NDUFA1O15239 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFA1O15239 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFA1O15239 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFA1O15239 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFA1O15239 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFA1O15239 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC13.01□□□□□ -0.33
NDUFA1O15239 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC13.01□□□□□ -0.33
NDUFA1O15239 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC13.01□□□□□ -0.33
NDUFA1O15239 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC13.01□□□□□ -0.33
NDUFA1O15239 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFA1O15239 AC010980.2-201ENST00000587099 1412 ntBASIC13.01□□□□□ -0.33
NDUFA1O15239 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFA1O15239 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC13.01□□□□□ -0.33
NDUFA1O15239 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFA1O15239 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFA1O15239 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC13.01□□□□□ -0.33
NDUFA1O15239 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFA1O15239 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC13.01□□□□□ -0.33
NDUFA1O15239 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC13.01□□□□□ -0.33
NDUFA1O15239 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFA1O15239 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFA1O15239 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC13.01□□□□□ -0.33
NDUFA1O15239 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFA1O15239 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFA1O15239 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
NDUFA1O15239 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFA1O15239 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
NDUFA1O15239 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
NDUFA1O15239 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC13□□□□□ -0.33
NDUFA1O15239 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NDUFA1O15239 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC13□□□□□ -0.33
NDUFA1O15239 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC13□□□□□ -0.33
NDUFA1O15239 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC13□□□□□ -0.33
NDUFA1O15239 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC13□□□□□ -0.33
NDUFA1O15239 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
NDUFA1O15239 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC13□□□□□ -0.33
NDUFA1O15239 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NDUFA1O15239 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
NDUFA1O15239 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC13□□□□□ -0.33
NDUFA1O15239 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NDUFA1O15239 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
NDUFA1O15239 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NDUFA1O15239 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC13□□□□□ -0.33
NDUFA1O15239 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC13□□□□□ -0.33
NDUFA1O15239 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC13□□□□□ -0.33
NDUFA1O15239 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
NDUFA1O15239 LSM12P1-201ENST00000411836 588 ntBASIC13□□□□□ -0.33
NDUFA1O15239 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC13□□□□□ -0.33
NDUFA1O15239 AL355472.2-201ENST00000422958 438 ntBASIC13□□□□□ -0.33
NDUFA1O15239 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NDUFA1O15239 ISCU-212ENST00000547005 795 ntTSL 3 BASIC13□□□□□ -0.33
NDUFA1O15239 MIR5787-201ENST00000611784 55 ntBASIC13□□□□□ -0.33
NDUFA1O15239 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC13□□□□□ -0.33
NDUFA1O15239 FZD10-202ENST00000539839 3282 ntBASIC13□□□□□ -0.33
NDUFA1O15239 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NDUFA1O15239 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NDUFA1O15239 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
NDUFA1O15239 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
NDUFA1O15239 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC13□□□□□ -0.33
NDUFA1O15239 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NDUFA1O15239 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
NDUFA1O15239 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
NDUFA1O15239 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
NDUFA1O15239 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NDUFA1O15239 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC13□□□□□ -0.33
NDUFA1O15239 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC13□□□□□ -0.33
NDUFA1O15239 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC12.99□□□□□ -0.33
NDUFA1O15239 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms