Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMAD9O15198 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMAD9O15198 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMAD9O15198 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
SMAD9O15198 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMAD9O15198 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMAD9O15198 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMAD9O15198 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.25■□□□□ 0.35
SMAD9O15198 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.25■□□□□ 0.35
SMAD9O15198 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SMAD9O15198 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
SMAD9O15198 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.25■□□□□ 0.35
SMAD9O15198 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SMAD9O15198 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
SMAD9O15198 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SMAD9O15198 Z85996.1-201ENST00000494644 937 ntBASIC17.25■□□□□ 0.35
SMAD9O15198 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.25■□□□□ 0.35
SMAD9O15198 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SMAD9O15198 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SMAD9O15198 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.25■□□□□ 0.35
SMAD9O15198 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.25■□□□□ 0.35
SMAD9O15198 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.25■□□□□ 0.35
SMAD9O15198 AC026471.5-201ENST00000615068 467 ntBASIC17.25■□□□□ 0.35
SMAD9O15198 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SMAD9O15198 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMAD9O15198 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.25■□□□□ 0.35
SMAD9O15198 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMAD9O15198 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.25■□□□□ 0.35
SMAD9O15198 AC004408.2-201ENST00000623613 2777 ntBASIC17.25■□□□□ 0.35
SMAD9O15198 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SMAD9O15198 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
SMAD9O15198 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMAD9O15198 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMAD9O15198 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMAD9O15198 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMAD9O15198 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.25■□□□□ 0.35
SMAD9O15198 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMAD9O15198 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SMAD9O15198 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMAD9O15198 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMAD9O15198 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMAD9O15198 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.24■□□□□ 0.35
SMAD9O15198 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.24■□□□□ 0.35
SMAD9O15198 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.24■□□□□ 0.35
SMAD9O15198 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.24■□□□□ 0.35
SMAD9O15198 NUDT16P1-203ENST00000513809 620 ntBASIC17.24■□□□□ 0.35
SMAD9O15198 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.24■□□□□ 0.35
SMAD9O15198 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.24■□□□□ 0.35
SMAD9O15198 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.24■□□□□ 0.35
SMAD9O15198 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMAD9O15198 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMAD9O15198 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMAD9O15198 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMAD9O15198 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
SMAD9O15198 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMAD9O15198 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.24■□□□□ 0.35
SMAD9O15198 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SMAD9O15198 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMAD9O15198 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMAD9O15198 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMAD9O15198 AP000974.1-201ENST00000623909 2387 ntBASIC17.24■□□□□ 0.35
SMAD9O15198 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SMAD9O15198 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMAD9O15198 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMAD9O15198 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.24■□□□□ 0.35
SMAD9O15198 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.24■□□□□ 0.35
SMAD9O15198 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
SMAD9O15198 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.23■□□□□ 0.35
SMAD9O15198 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMAD9O15198 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMAD9O15198 SDHAP1-207ENST00000440850 2000 ntBASIC17.23■□□□□ 0.35
SMAD9O15198 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMAD9O15198 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMAD9O15198 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMAD9O15198 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SMAD9O15198 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.23■□□□□ 0.35
SMAD9O15198 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMAD9O15198 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMAD9O15198 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SMAD9O15198 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMAD9O15198 AL355355.2-201ENST00000442321 338 ntBASIC17.23■□□□□ 0.35
SMAD9O15198 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMAD9O15198 MIR4785-201ENST00000585005 73 ntBASIC17.23■□□□□ 0.35
SMAD9O15198 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
SMAD9O15198 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.23■□□□□ 0.35
SMAD9O15198 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMAD9O15198 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMAD9O15198 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMAD9O15198 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.23■□□□□ 0.35
SMAD9O15198 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
SMAD9O15198 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMAD9O15198 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.23■□□□□ 0.35
SMAD9O15198 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMAD9O15198 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMAD9O15198 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SMAD9O15198 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SMAD9O15198 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMAD9O15198 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMAD9O15198 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMAD9O15198 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms