Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM38O00635 TSPY14P-201ENST00000303979 915 ntBASIC19.11■□□□□ 0.65
TRIM38O00635 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TRIM38O00635 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM38O00635 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.11■□□□□ 0.65
TRIM38O00635 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM38O00635 EGLN1P1-201ENST00000531623 762 ntBASIC19.11■□□□□ 0.65
TRIM38O00635 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM38O00635 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
TRIM38O00635 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.11■□□□□ 0.65
TRIM38O00635 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM38O00635 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM38O00635 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.11■□□□□ 0.65
TRIM38O00635 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM38O00635 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM38O00635 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TRIM38O00635 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM38O00635 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.11■□□□□ 0.65
TRIM38O00635 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM38O00635 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM38O00635 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.1■□□□□ 0.65
TRIM38O00635 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM38O00635 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM38O00635 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
TRIM38O00635 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM38O00635 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM38O00635 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM38O00635 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM38O00635 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.1■□□□□ 0.65
TRIM38O00635 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM38O00635 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM38O00635 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM38O00635 INGX-201ENST00000359239 846 ntBASIC19.1■□□□□ 0.65
TRIM38O00635 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.1■□□□□ 0.65
TRIM38O00635 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.1■□□□□ 0.65
TRIM38O00635 AC006011.2-201ENST00000621313 1158 ntBASIC19.1■□□□□ 0.65
TRIM38O00635 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM38O00635 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM38O00635 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.1■□□□□ 0.65
TRIM38O00635 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM38O00635 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
TRIM38O00635 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM38O00635 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM38O00635 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM38O00635 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM38O00635 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
TRIM38O00635 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM38O00635 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM38O00635 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM38O00635 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.09■□□□□ 0.65
TRIM38O00635 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM38O00635 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM38O00635 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM38O00635 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.09■□□□□ 0.65
TRIM38O00635 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
TRIM38O00635 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM38O00635 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM38O00635 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM38O00635 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.09■□□□□ 0.65
TRIM38O00635 LIN28AP1-201ENST00000429574 405 ntBASIC19.09■□□□□ 0.65
TRIM38O00635 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
TRIM38O00635 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM38O00635 AC130371.2-201ENST00000619443 611 ntBASIC19.09■□□□□ 0.65
TRIM38O00635 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM38O00635 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.09■□□□□ 0.65
TRIM38O00635 PHGDH-210ENST00000641115 1638 ntBASIC19.09■□□□□ 0.65
TRIM38O00635 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.09■□□□□ 0.65
TRIM38O00635 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
TRIM38O00635 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.09■□□□□ 0.65
TRIM38O00635 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM38O00635 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.09■□□□□ 0.65
TRIM38O00635 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
TRIM38O00635 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TRIM38O00635 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRIM38O00635 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.08■□□□□ 0.65
TRIM38O00635 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
TRIM38O00635 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRIM38O00635 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRIM38O00635 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
TRIM38O00635 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM38O00635 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM38O00635 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM38O00635 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
TRIM38O00635 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.08■□□□□ 0.64
TRIM38O00635 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM38O00635 ATP5G1P1-201ENST00000448724 379 ntBASIC19.08■□□□□ 0.64
TRIM38O00635 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.08■□□□□ 0.64
TRIM38O00635 AC008040.2-201ENST00000461049 708 ntBASIC19.08■□□□□ 0.64
TRIM38O00635 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM38O00635 SLC25A1P4-201ENST00000567977 778 ntBASIC19.08■□□□□ 0.64
TRIM38O00635 WWOX-216ENST00000569818 525 ntBASIC19.08■□□□□ 0.64
TRIM38O00635 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.08■□□□□ 0.64
TRIM38O00635 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM38O00635 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
TRIM38O00635 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM38O00635 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM38O00635 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM38O00635 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM38O00635 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
TRIM38O00635 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms