Protein–RNA interactions for Protein: O00629

KPNA4, Importin subunit alpha-3, humanhuman

Predicted RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4O00629 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KPNA4O00629 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
KPNA4O00629 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.76■□□□□ 0.43
KPNA4O00629 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
KPNA4O00629 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.76■□□□□ 0.43
KPNA4O00629 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.76■□□□□ 0.43
KPNA4O00629 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
KPNA4O00629 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
KPNA4O00629 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
KPNA4O00629 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
KPNA4O00629 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.76■□□□□ 0.43
KPNA4O00629 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KPNA4O00629 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.75■□□□□ 0.43
KPNA4O00629 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
KPNA4O00629 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
KPNA4O00629 AC106820.2-201ENST00000563775 3264 ntBASIC17.75■□□□□ 0.43
KPNA4O00629 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KPNA4O00629 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
KPNA4O00629 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KPNA4O00629 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
KPNA4O00629 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.75■□□□□ 0.43
KPNA4O00629 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.75■□□□□ 0.43
KPNA4O00629 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
KPNA4O00629 AC073210.2-201ENST00000430369 194 ntBASIC17.75■□□□□ 0.43
KPNA4O00629 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
KPNA4O00629 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.75■□□□□ 0.43
KPNA4O00629 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.75■□□□□ 0.43
KPNA4O00629 AC097658.1-201ENST00000475555 843 ntBASIC17.75■□□□□ 0.43
KPNA4O00629 AL138781.1-201ENST00000566567 1274 ntBASIC17.75■□□□□ 0.43
KPNA4O00629 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.75■□□□□ 0.43
KPNA4O00629 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.75■□□□□ 0.43
KPNA4O00629 AC092666.2-201ENST00000613287 246 ntBASIC17.75■□□□□ 0.43
KPNA4O00629 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
KPNA4O00629 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KPNA4O00629 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
KPNA4O00629 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KPNA4O00629 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KPNA4O00629 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
KPNA4O00629 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
KPNA4O00629 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
KPNA4O00629 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
KPNA4O00629 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KPNA4O00629 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KPNA4O00629 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
KPNA4O00629 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KPNA4O00629 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KPNA4O00629 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KPNA4O00629 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.74■□□□□ 0.43
KPNA4O00629 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
KPNA4O00629 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.74■□□□□ 0.43
KPNA4O00629 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.74■□□□□ 0.43
KPNA4O00629 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KPNA4O00629 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
KPNA4O00629 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.74■□□□□ 0.43
KPNA4O00629 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KPNA4O00629 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
KPNA4O00629 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.74■□□□□ 0.43
KPNA4O00629 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.74■□□□□ 0.43
KPNA4O00629 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.74■□□□□ 0.43
KPNA4O00629 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
KPNA4O00629 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.74■□□□□ 0.43
KPNA4O00629 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
KPNA4O00629 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KPNA4O00629 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KPNA4O00629 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
KPNA4O00629 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
KPNA4O00629 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KPNA4O00629 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.74■□□□□ 0.43
KPNA4O00629 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
KPNA4O00629 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
KPNA4O00629 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
KPNA4O00629 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.74■□□□□ 0.43
KPNA4O00629 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KPNA4O00629 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
KPNA4O00629 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.73■□□□□ 0.43
KPNA4O00629 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KPNA4O00629 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
KPNA4O00629 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
KPNA4O00629 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
KPNA4O00629 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
KPNA4O00629 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KPNA4O00629 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KPNA4O00629 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.73■□□□□ 0.43
KPNA4O00629 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KPNA4O00629 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
KPNA4O00629 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KPNA4O00629 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KPNA4O00629 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.73■□□□□ 0.43
KPNA4O00629 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
KPNA4O00629 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.73■□□□□ 0.43
KPNA4O00629 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.73■□□□□ 0.43
KPNA4O00629 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.73■□□□□ 0.43
KPNA4O00629 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.73■□□□□ 0.43
KPNA4O00629 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
KPNA4O00629 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.73■□□□□ 0.43
KPNA4O00629 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.73■□□□□ 0.43
KPNA4O00629 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
KPNA4O00629 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
KPNA4O00629 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KPNA4O00629 AC012313.1-201ENST00000593393 3059 ntBASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms