Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDC7O00311 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDC7O00311 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.65■□□□□ 0.58
CDC7O00311 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CDC7O00311 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.65■□□□□ 0.58
CDC7O00311 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.65■□□□□ 0.58
CDC7O00311 AL353708.3-201ENST00000610272 989 ntBASIC18.65■□□□□ 0.58
CDC7O00311 ITM2C-210ENST00000620962 501 ntBASIC18.65■□□□□ 0.58
CDC7O00311 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDC7O00311 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.65■□□□□ 0.58
CDC7O00311 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDC7O00311 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.65■□□□□ 0.58
CDC7O00311 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDC7O00311 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDC7O00311 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDC7O00311 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CDC7O00311 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDC7O00311 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CDC7O00311 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.65■□□□□ 0.58
CDC7O00311 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDC7O00311 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CDC7O00311 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
CDC7O00311 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
CDC7O00311 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CDC7O00311 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.64■□□□□ 0.58
CDC7O00311 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CDC7O00311 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
CDC7O00311 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.58
CDC7O00311 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
CDC7O00311 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.64■□□□□ 0.58
CDC7O00311 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CDC7O00311 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDC7O00311 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDC7O00311 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDC7O00311 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CDC7O00311 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDC7O00311 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDC7O00311 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.64■□□□□ 0.57
CDC7O00311 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.64■□□□□ 0.57
CDC7O00311 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDC7O00311 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.64■□□□□ 0.57
CDC7O00311 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.64■□□□□ 0.57
CDC7O00311 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.64■□□□□ 0.57
CDC7O00311 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.64■□□□□ 0.57
CDC7O00311 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDC7O00311 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDC7O00311 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CDC7O00311 KRT8P11-201ENST00000409686 1436 ntBASIC18.64■□□□□ 0.57
CDC7O00311 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDC7O00311 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.64■□□□□ 0.57
CDC7O00311 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
CDC7O00311 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.64■□□□□ 0.57
CDC7O00311 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDC7O00311 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDC7O00311 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.64■□□□□ 0.57
CDC7O00311 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDC7O00311 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.63■□□□□ 0.57
CDC7O00311 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDC7O00311 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CDC7O00311 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDC7O00311 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDC7O00311 NEFHP1-201ENST00000412845 2629 ntBASIC18.63■□□□□ 0.57
CDC7O00311 AC104581.1-202ENST00000635932 2618 ntBASIC18.63■□□□□ 0.57
CDC7O00311 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDC7O00311 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDC7O00311 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDC7O00311 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDC7O00311 KRT18P29-201ENST00000397031 1267 ntBASIC18.63■□□□□ 0.57
CDC7O00311 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.63■□□□□ 0.57
CDC7O00311 KSR1P1-201ENST00000446298 240 ntBASIC18.63■□□□□ 0.57
CDC7O00311 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.63■□□□□ 0.57
CDC7O00311 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.63■□□□□ 0.57
CDC7O00311 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.63■□□□□ 0.57
CDC7O00311 FAM197Y4-202ENST00000622692 608 ntBASIC18.63■□□□□ 0.57
CDC7O00311 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.63■□□□□ 0.57
CDC7O00311 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.63■□□□□ 0.57
CDC7O00311 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CDC7O00311 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDC7O00311 Z98044.1-201ENST00000632503 1764 ntBASIC18.63■□□□□ 0.57
CDC7O00311 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDC7O00311 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDC7O00311 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDC7O00311 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDC7O00311 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.62■□□□□ 0.57
CDC7O00311 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
CDC7O00311 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDC7O00311 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CDC7O00311 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDC7O00311 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDC7O00311 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDC7O00311 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.62■□□□□ 0.57
CDC7O00311 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CDC7O00311 PRORSD1P-201ENST00000295112 541 ntBASIC18.62■□□□□ 0.57
CDC7O00311 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.62■□□□□ 0.57
CDC7O00311 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CDC7O00311 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDC7O00311 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.62■□□□□ 0.57
CDC7O00311 AF186192.3-201ENST00000583427 947 ntBASIC18.62■□□□□ 0.57
CDC7O00311 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.62■□□□□ 0.57
CDC7O00311 CR392000.1-201ENST00000624770 1228 ntBASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 180.9 ms