Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.59■□□□□ 0.41
TNFRSF11BO00300 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.59■□□□□ 0.41
TNFRSF11BO00300 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.59■□□□□ 0.41
TNFRSF11BO00300 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.59■□□□□ 0.41
TNFRSF11BO00300 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
TNFRSF11BO00300 AC105036.2-201ENST00000569468 176 ntBASIC17.59■□□□□ 0.41
TNFRSF11BO00300 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.59■□□□□ 0.41
TNFRSF11BO00300 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.59■□□□□ 0.41
TNFRSF11BO00300 AL121906.2-201ENST00000621597 723 ntBASIC17.59■□□□□ 0.41
TNFRSF11BO00300 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.59■□□□□ 0.41
TNFRSF11BO00300 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.59■□□□□ 0.41
TNFRSF11BO00300 PCDHB18P-201ENST00000524813 2368 ntBASIC17.59■□□□□ 0.41
TNFRSF11BO00300 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TNFRSF11BO00300 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TNFRSF11BO00300 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TNFRSF11BO00300 NOC2LP2-201ENST00000407594 1944 ntBASIC17.59■□□□□ 0.41
TNFRSF11BO00300 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TNFRSF11BO00300 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
TNFRSF11BO00300 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TNFRSF11BO00300 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TNFRSF11BO00300 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TNFRSF11BO00300 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TNFRSF11BO00300 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TNFRSF11BO00300 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
TNFRSF11BO00300 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.58■□□□□ 0.41
TNFRSF11BO00300 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
TNFRSF11BO00300 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TNFRSF11BO00300 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TNFRSF11BO00300 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TNFRSF11BO00300 AF201337.1-201ENST00000520239 748 ntBASIC17.58■□□□□ 0.4
TNFRSF11BO00300 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.58■□□□□ 0.4
TNFRSF11BO00300 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.58■□□□□ 0.4
TNFRSF11BO00300 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.58■□□□□ 0.4
TNFRSF11BO00300 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
TNFRSF11BO00300 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TNFRSF11BO00300 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TNFRSF11BO00300 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TNFRSF11BO00300 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TNFRSF11BO00300 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TNFRSF11BO00300 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.58■□□□□ 0.4
TNFRSF11BO00300 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TNFRSF11BO00300 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TNFRSF11BO00300 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TNFRSF11BO00300 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TNFRSF11BO00300 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TNFRSF11BO00300 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TNFRSF11BO00300 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
TNFRSF11BO00300 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TNFRSF11BO00300 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TNFRSF11BO00300 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.57■□□□□ 0.4
TNFRSF11BO00300 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TNFRSF11BO00300 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
TNFRSF11BO00300 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TNFRSF11BO00300 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.57■□□□□ 0.4
TNFRSF11BO00300 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TNFRSF11BO00300 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
TNFRSF11BO00300 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.57■□□□□ 0.4
TNFRSF11BO00300 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TNFRSF11BO00300 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.57■□□□□ 0.4
TNFRSF11BO00300 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.57■□□□□ 0.4
TNFRSF11BO00300 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.57■□□□□ 0.4
TNFRSF11BO00300 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.57■□□□□ 0.4
TNFRSF11BO00300 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TNFRSF11BO00300 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TNFRSF11BO00300 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TNFRSF11BO00300 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TNFRSF11BO00300 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TNFRSF11BO00300 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.57■□□□□ 0.4
TNFRSF11BO00300 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TNFRSF11BO00300 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.57■□□□□ 0.4
TNFRSF11BO00300 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TNFRSF11BO00300 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TNFRSF11BO00300 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.57■□□□□ 0.4
TNFRSF11BO00300 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TNFRSF11BO00300 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TNFRSF11BO00300 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
TNFRSF11BO00300 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TNFRSF11BO00300 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TNFRSF11BO00300 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TNFRSF11BO00300 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TNFRSF11BO00300 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TNFRSF11BO00300 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TNFRSF11BO00300 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TNFRSF11BO00300 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TNFRSF11BO00300 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TNFRSF11BO00300 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TNFRSF11BO00300 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TNFRSF11BO00300 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.56■□□□□ 0.4
TNFRSF11BO00300 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
TNFRSF11BO00300 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TNFRSF11BO00300 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
TNFRSF11BO00300 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TNFRSF11BO00300 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TNFRSF11BO00300 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TNFRSF11BO00300 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TNFRSF11BO00300 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TNFRSF11BO00300 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TNFRSF11BO00300 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TNFRSF11BO00300 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TNFRSF11BO00300 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms