Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.84■□□□□ 0.45
PRAMEF25A6NGN4 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEF25A6NGN4 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.84■□□□□ 0.45
PRAMEF25A6NGN4 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.84■□□□□ 0.45
PRAMEF25A6NGN4 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEF25A6NGN4 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEF25A6NGN4 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.84■□□□□ 0.45
PRAMEF25A6NGN4 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.84■□□□□ 0.45
PRAMEF25A6NGN4 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEF25A6NGN4 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
PRAMEF25A6NGN4 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.84■□□□□ 0.45
PRAMEF25A6NGN4 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEF25A6NGN4 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEF25A6NGN4 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEF25A6NGN4 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.84■□□□□ 0.45
PRAMEF25A6NGN4 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.84■□□□□ 0.45
PRAMEF25A6NGN4 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
PRAMEF25A6NGN4 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEF25A6NGN4 RPS2P4-201ENST00000476944 856 ntBASIC17.84■□□□□ 0.45
PRAMEF25A6NGN4 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.84■□□□□ 0.45
PRAMEF25A6NGN4 AC233702.5-201ENST00000584107 538 ntBASIC17.84■□□□□ 0.45
PRAMEF25A6NGN4 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.84■□□□□ 0.45
PRAMEF25A6NGN4 Z99916.2-201ENST00000604037 246 ntBASIC17.84■□□□□ 0.45
PRAMEF25A6NGN4 AP001412.1-201ENST00000608405 714 ntBASIC17.84■□□□□ 0.45
PRAMEF25A6NGN4 AL353708.3-201ENST00000610272 989 ntBASIC17.84■□□□□ 0.45
PRAMEF25A6NGN4 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEF25A6NGN4 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.84■□□□□ 0.45
PRAMEF25A6NGN4 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEF25A6NGN4 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEF25A6NGN4 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEF25A6NGN4 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.84■□□□□ 0.45
PRAMEF25A6NGN4 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEF25A6NGN4 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEF25A6NGN4 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEF25A6NGN4 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.83■□□□□ 0.45
PRAMEF25A6NGN4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.83■□□□□ 0.45
PRAMEF25A6NGN4 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.83■□□□□ 0.45
PRAMEF25A6NGN4 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PRAMEF25A6NGN4 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF25A6NGN4 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF25A6NGN4 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.83■□□□□ 0.44
PRAMEF25A6NGN4 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
PRAMEF25A6NGN4 NIFKP9-201ENST00000419265 221 ntBASIC17.83■□□□□ 0.44
PRAMEF25A6NGN4 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.83■□□□□ 0.44
PRAMEF25A6NGN4 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF25A6NGN4 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF25A6NGN4 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.83■□□□□ 0.44
PRAMEF25A6NGN4 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.83■□□□□ 0.44
PRAMEF25A6NGN4 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF25A6NGN4 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
PRAMEF25A6NGN4 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.83■□□□□ 0.44
PRAMEF25A6NGN4 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF25A6NGN4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
PRAMEF25A6NGN4 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF25A6NGN4 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.83■□□□□ 0.44
PRAMEF25A6NGN4 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.83■□□□□ 0.44
PRAMEF25A6NGN4 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF25A6NGN4 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF25A6NGN4 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF25A6NGN4 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEF25A6NGN4 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PRAMEF25A6NGN4 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEF25A6NGN4 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEF25A6NGN4 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEF25A6NGN4 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PRAMEF25A6NGN4 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEF25A6NGN4 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEF25A6NGN4 IRX1P1-201ENST00000438849 1838 ntBASIC17.82■□□□□ 0.44
PRAMEF25A6NGN4 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.82■□□□□ 0.44
PRAMEF25A6NGN4 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEF25A6NGN4 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.82■□□□□ 0.44
PRAMEF25A6NGN4 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PRAMEF25A6NGN4 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEF25A6NGN4 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.82■□□□□ 0.44
PRAMEF25A6NGN4 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PRAMEF25A6NGN4 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEF25A6NGN4 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.82■□□□□ 0.44
PRAMEF25A6NGN4 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.82■□□□□ 0.44
PRAMEF25A6NGN4 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEF25A6NGN4 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.82■□□□□ 0.44
PRAMEF25A6NGN4 AC073195.1-201ENST00000607241 877 ntBASIC17.82■□□□□ 0.44
PRAMEF25A6NGN4 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEF25A6NGN4 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEF25A6NGN4 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEF25A6NGN4 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PRAMEF25A6NGN4 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEF25A6NGN4 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PRAMEF25A6NGN4 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.82■□□□□ 0.44
PRAMEF25A6NGN4 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.82■□□□□ 0.44
PRAMEF25A6NGN4 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEF25A6NGN4 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF25A6NGN4 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF25A6NGN4 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
PRAMEF25A6NGN4 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF25A6NGN4 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF25A6NGN4 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
PRAMEF25A6NGN4 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF25A6NGN4 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF25A6NGN4 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF25A6NGN4 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms